RetrogeneDB ID: | retro_nleu_2263 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397339.1:8503420..8504004(+) | ||
Located in intron of: | ENSNLEG00000009641 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPE | ||
Ensembl ID: | ENSNLEG00000007172 | ||
Aliases: | None | ||
Description: | Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:G1R6C4] |
Percent Identity: | 78.17 % |
Parental protein coverage: | 85.96 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | YLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPG |
..HLDV.DGHFVPN.TFG.PVVES..KQL.QD.FFD...MVS..EQWVKP.A.AGA.QYTFHLEAT.... | |
Retrocopy | WVHLDVVDGHFVPNVTFGYPVVESFQKQLVQDSFFDIRVMVS*LEQWVKPIAIAGASQYTFHLEATKYSE |
Parental | ALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDI |
ALI.DI.ENGMKVGL.IKPGT.VEYLAPW.NQID.ALV.TVEPGFG.QKFM.DM.P..HWLRTQFP.LD. | |
Retrocopy | ALIEDIWENGMKVGLTIKPGTTVEYLAPWTNQIDTALVFTVEPGFGRQKFMDDMVPNIHWLRTQFPALDK |
Parental | -EVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR |
.EVDGGVGPDTVHKCAEAGANMI.SGS..MRSEDPRSVINLLRN.CSEA.QK.SLD. | |
Retrocopy | <EVDGGVGPDTVHKCAEAGANMIMSGS-VMRSEDPRSVINLLRNICSEATQKQSLDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |