RetrogeneDB ID: | retro_mputfur_727 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896941.1:7289348..7289799(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJC9 | ||
Ensembl ID: | ENSMPUG00000003792 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:HGNC Symbol;Acc:19123] |
Percent Identity: | 57.79 % |
Parental protein coverage: | 57.47 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | EDIQAFEKTYKGSEEELADIKQAYLDFKGDMDQIMESVLCVQYTDEPRIRNIIQQAIDAGEIPSYNAFVK |
EDIQ.F.K.YKGSEEELA........FK.D.DQ...S.L.V.Y..EPRI.N..QQ.....E..SYNAFVK | |
Retrocopy | EDIQEFGKIYKGSEEELAILNKTT*NFKSDLDQLTQSMLYVEYAEEPRI*NLLQQTNHTREVLSYNAFVK |
Parental | ESKQKMNARK-RRAQEEAKEAEISRKELG--LDEGVDNLKSI-IQSRQKDRQKEMDNFLAQMEAKYCKPS |
ES..KMNARK.R.AQEEAK...I..K.LG......VD.LK....QSRQKD.Q.EMDN.LAQ...KY.KPS | |
Retrocopy | ESN*KMNARK<RMAQEEAKDPDITWKALGGMMKKEVDKLKPL<VQSRQKDGQQEMDNVLAQIKSKYYKPS |
Parental | KRGGKKTPLKKEKK |
K.GG....LKKE.K | |
Retrocopy | K-GGEERALKKESK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000016933 | 1 retrocopy | |
Felis catus | ENSFCAG00000004448 | 1 retrocopy | |
Homo sapiens | ENSG00000213551 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000015046 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000004539 | 3 retrocopies | |
Mustela putorius furo | ENSMPUG00000003792 | 1 retrocopy |
retro_mputfur_727 ,
|
Nomascus leucogenys | ENSNLEG00000016595 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000003496 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000002343 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000034219 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000028067 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000011504 | 1 retrocopy |