RetrogeneDB ID: | retro_nleu_1095 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397281.1:20827832..20828267(+) | ||
Located in intron of: | ENSNLEG00000010004 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C11ORF73 | ||
Ensembl ID: | ENSNLEG00000016224 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.3 % |
Parental protein coverage: | 74.11 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | GSVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGEGSQHPFGAMNIVRTPSVAQIGISVELLDSM |
GSVYFSYPDSNGMPV.QLL.FV.NGKPSAIFKISGLKSG.GSQ.PFGAMNIV.TPSVAQ.GISVE.LDSM | |
Retrocopy | GSVYFSYPDSNGMPV*QLL*FVMNGKPSAIFKISGLKSGGGSQYPFGAMNIVQTPSVAQMGISVESLDSM |
Parental | AQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSEMFIPANVVLKWYENFQRRLAQN |
A.QTPVGN.AVSSVDSFT.FTQKMLDN.YNFASSFAVSQAQMTPS..EMFI...V.LKWYENFQR.L.QN | |
Retrocopy | AHQTPVGN-AVSSVDSFTLFTQKMLDNLYNFASSFAVSQAQMTPSLYEMFILQSVFLKWYENFQR*LPQN |
Parental | PLFWKT |
PLFWKT | |
Retrocopy | PLFWKT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Equus caballus | ENSECAG00000015605 | 1 retrocopy | |
Homo sapiens | ENSG00000149196 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000023168 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000016260 | 1 retrocopy | |
Mus musculus | ENSMUSG00000062797 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000016224 | 1 retrocopy |
retro_nleu_1095 ,
|
Oryctolagus cuniculus | ENSOCUG00000013108 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000003746 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000004144 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000009192 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000012267 | 1 retrocopy |