RetrogeneDB ID: | retro_ogar_3171 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873735.1:1918019..1918489(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000009132 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.48 % |
Parental protein coverage: | 56.68 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | IRPFREHHIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFCTQSREALEQ-LYPWECFVFCLIIFGTFT |
.RPF.EHHIDPTAI..HDF.ETNGDNCLVTLL.LL.MAYKFCTQS.E.LEQ..YPWECFVFCLIIFGTFT | |
Retrocopy | LRPFQEHHIDPTAIRWHDFMETNGDNCLVTLLSLLYMAYKFCTQSHETLEQ<MYPWECFVFCLIIFGTFT |
Parental | NQIHKWSHTYFGLPRWVTLLQDWHIILPRKHHRIHHVSPHETYFCITTGWLNYPLEKIGFWRRLEDIIQG |
NQIHK..HTYF.LP.WVTLLQ.WH.ILP.K.H.I.HVS.H.TYFCITT...NYPL.K.GFW..LEDIIQG | |
Retrocopy | NQIHKPLHTYFWLPCWVTLLQNWHVILPPKRHCIYHVSSHKTYFCITTVGVNYPLQKLGFWTCLEDIIQG |
Parental | LTGEKPRADDMKWAQKIK |
L.GEKP.ADD.K.AQKIK | |
Retrocopy | LMGEKPQADDIKLAQKIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Mus musculus | ENSMUSG00000090213 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000009132 | 1 retrocopy |
retro_ogar_3171 ,
|
Otolemur garnettii | ENSOGAG00000025894 | 12 retrocopies |