RetrogeneDB ID: | retro_pcap_154 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_117124:4279..4672(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EEF1B2 | ||
Ensembl ID: | ENSPCAG00000013348 | ||
Aliases: | None | ||
Description: | eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:3208] |
Percent Identity: | 93.13 % |
Parental protein coverage: | 58.04 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SKDDDD-DLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRS |
SKDD.D.DLFGSDDEEESEEAKRLREERLA.YESKKAKKP.LV.KSSI.LDVKPWDDETDMAKLEECVRS | |
Retrocopy | SKDDEDIDLFGSDDEEESEEAKRLREERLAWYESKKAKKPVLVVKSSISLDVKPWDDETDMAKLEECVRS |
Parental | IQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEKITAFEDYVQSMDVAAFNKI |
IQADGLVWGSSKL.PVGYGIKKLQIQCVVEDDKVGTDMLEEK.TAFEDYVQSMDV.AFNKI | |
Retrocopy | IQADGLVWGSSKLLPVGYGIKKLQIQCVVEDDKVGTDMLEEKTTAFEDYVQSMDVTAFNKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |