RetrogeneDB ID: | retro_shar_578 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL850399.1:48330..48957(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TAZ | ||
Ensembl ID: | ENSSHAG00000001896 | ||
Aliases: | None | ||
Description: | tafazzin [Source:HGNC Symbol;Acc:11577] |
Percent Identity: | 82.46 % |
Parental protein coverage: | 79.77 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LIENRDPGTPLITVSNHQSCMDDPHLWGILKLRHIWNLRLMRWT-PAAADICFTKELHSHFFSLGKCVPV |
.IENRDPGT..I.VSNHQSCMDDPHLWGILKL.HIWNL.LMRWT.P.AA.I.FTKELHSHFFSL.KCVPV | |
Retrocopy | IIENRDPGTLQIIVSNHQSCMDDPHLWGILKLHHIWNLKLMRWT<PVAANIYFTKELHSHFFSLEKCVPV |
Parental | CRGDGVYQRGMDFILEKLNNGDWVHIFPEGKVNMSQEFLRFKWGIGRLVAECHLNPIILPLWHIGMSDVL |
C.GDGVYQ..M.F.LEKLNN...VHIFPEGKV.MSQEFLRFKW.IG.LVAECHLNPIILPLWHIGMSDVL | |
Retrocopy | C*GDGVYQKVMHFALEKLNNRA*VHIFPEGKVHMSQEFLRFKWEIGCLVAECHLNPIILPLWHIGMSDVL |
Parental | PNAPPYFPRFGQ-KITVLIGKPFSAMPVLERLRSENKSAVEMRKALTDFIQDEFQSLKAQAESLHSHFQP |
PNAPPYF..F.Q.K.TVLIGKPF.AMPVLE.L.SENKSAV.MRKALT.FI.DEFQSLKA.AESLH.HF.P | |
Retrocopy | PNAPPYFSEFAQ>KVTVLIGKPFNAMPVLEHLQSENKSAVQMRKALTNFIRDEFQSLKAPAESLHNHFEP |
Parental | A |
. | |
Retrocopy | S |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000007456 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000012657 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000001896 | 1 retrocopy |
retro_shar_578 ,
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