RetrogeneDB ID: | retro_shar_626 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL856827.1:416892..417281(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000016094 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 63.16 % |
Parental protein coverage: | 94.89 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | VSGKVFIQRDYSSGTRCQFQTKFPA-ELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAY |
.S.K.FIQ.DYSS.T.CQFQTKF...ELEN.ID..QF..TV..LNNL.AE.EKLGGQSYL..CLACL.AY | |
Retrocopy | MSSKEFIQQDYSSSTYCQFQTKFTL<ELENWIDQLQFRKTVHILNNLSAETEKLGGQSYLRSCLACLAAY |
Parental | TI-FLCMETHYEKVLKKITKYIQEQ-NEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR |
....LCM..H...VLKKITK.IQ.....K.YA...LLLT.PIER.L.V.EIT.YEDR.M..G. | |
Retrocopy | IL>LLCMKIHDKNVLKKITKCIQAH<HKKTYALCALLLTHPIERRLDVTEITMYEDRDMK*GK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |