RetrogeneDB ID: | retro_stub_38 | ||
Retrocopylocation | Organism: | Potato (Solanum tuberosum) | |
Coordinates: | 5:5201356..5201623(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | PGSC0003DMG400025548 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | PGSC0003DMG400010156 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 97.67 % |
Parental protein coverage: | 91.49 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKKTSKQL |
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKKTSKQL | |
Retrocopy | MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKKTSKQL |
Parental | GRILLKGDNITLMMNS |
GRILLK.DNITLMMN. | |
Retrocopy | GRILLKSDNITLMMNT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Solanum tuberosum | PGSC0003DMG400010156 | 1 retrocopy |
retro_stub_38 ,
|
Prunus persica | PRUPE_ppa014076mg | 1 retrocopy |