RetrogeneDB ID: | retro_taes_5 | ||
Retrocopylocation | Organism: | Wheat (Triticum aestivum) | |
Coordinates: | IWGSC_CSS_4DS_scaff_772988:5..308(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | Traes_4DS_DB8C1AD1C | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | Traes_7AS_DD24F4515 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.16 % |
Parental protein coverage: | 75.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAVPLLTKKIVKKRVKHFKRAHSDRYIGLKQSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPN |
MAVPLLTKK.VKKR...F.R..SDR.I..K.SWRRPKGIDSRVRRKFKG.TLMPN.GYGSDKKTRHYLPN | |
Retrocopy | MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPN |
Parental | KFKKFVVHNVSELELLMMHNRTYCAEIAHNV |
.FKKFVVHN.S.LELLMMHNRTYCAEIAHNV | |
Retrocopy | GFKKFVVHNTSDLELLMMHNRTYCAEIAHNV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Medicago truncatula | MTR_7g053180 | 1 retrocopy | |
Triticum aestivum | Traes_7AS_DD24F4515 | 1 retrocopy |
retro_taes_5 ,
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