Common name: Wheat
Latin name: Triticum aestivum
Genome assembly: IWGSC1.0+popseq
All retrocopies: 204
Parental genes: 155

Summary: Number of retrocopies :
Conserved ORF: 154 ORF 50 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_taes_1 97.98 % 100.00 % ORF
2. retro_taes_2 88.79 % 54.04 % ORF
3. retro_taes_3 82.35 % 50.50 % ORF
4. retro_taes_4 87.37 % 87.80 % ORF
5. retro_taes_5 84.16 % 75.94 % ORF
6. retro_taes_6 88.46 % 56.77 % ORF
7. retro_taes_7 64.71 % 52.54 % ORF
8. retro_taes_8 54.72 % 69.68 % ORF
9. retro_taes_9 74.03 % 56.00 % ORF
10. retro_taes_10 82.12 % 72.68 % ORF
11. retro_taes_11 60.63 % 99.37 % ORF
12. retro_taes_12 86.36 % 51.16 % ORF
13. retro_taes_13 66.30 % 67.41 % ORF
14. retro_taes_14 84.30 % 63.24 % ORF
15. retro_taes_15 62.11 % 75.90 % ORF
16. retro_taes_16 88.00 % 78.67 % ORF
17. retro_taes_17 77.22 % 99.76 % ORF
18. retro_taes_18 91.72 % 50.35 % ORF
19. retro_taes_19 61.84 % 64.10 % ORF
20. retro_taes_20 70.41 % 53.85 % ORF
21. retro_taes_21 93.87 % 86.57 % ORF
22. retro_taes_22 88.28 % 86.05 % ORF
23. retro_taes_23 74.83 % 99.30 % ORF
24. retro_taes_24 76.22 % 86.44 % ORF
25. retro_taes_25 62.21 % 90.87 % ORF
26. retro_taes_26 96.97 % 60.74 % ORF
27. retro_taes_27 82.78 % 66.18 % ORF
28. retro_taes_28 60.37 % 98.43 % ORF
29. retro_taes_29 67.44 % 54.16 % ORF
30. retro_taes_30 59.76 % 83.33 % ORF
31. retro_taes_31 74.81 % 63.64 % ORF
32. retro_taes_32 99.58 % 100.00 % ORF
33. retro_taes_33 95.45 % 68.75 % ORF
34. retro_taes_34 63.75 % 100.00 % ORF
35. retro_taes_35 85.71 % 76.24 % ORF
36. retro_taes_36 56.85 % 93.73 % ORF
37. retro_taes_37 88.01 % 99.30 % ORF
38. retro_taes_38 55.26 % 73.45 % ORF
39. retro_taes_39 84.21 % 77.03 % ORF
40. retro_taes_40 87.20 % 96.03 % ORF
41. retro_taes_41 73.31 % 91.46 % ORF
42. retro_taes_42 80.90 % 52.51 % ORF
43. retro_taes_43 85.81 % 92.50 % ORF
44. retro_taes_44 88.96 % 91.03 % ORF
45. retro_taes_45 93.42 % 99.35 % ORF
46. retro_taes_46 81.78 % 86.94 % ORF
47. retro_taes_47 78.95 % 50.80 % ORF
48. retro_taes_48 89.72 % 99.15 % ORF
49. retro_taes_49 79.93 % 99.82 % ORF
50. retro_taes_50 73.60 % 52.53 % ORF
51. retro_taes_51 57.38 % 90.32 % ORF
52. retro_taes_52 62.89 % 90.19 % ORF
53. retro_taes_53 51.57 % 64.15 % ORF
54. retro_taes_54 82.19 % 90.06 % ORF
55. retro_taes_55 79.87 % 80.39 % ORF
56. retro_taes_56 81.44 % 86.94 % ORF
57. retro_taes_57 83.47 % 54.50 % ORF
58. retro_taes_58 93.41 % 98.91 % ORF
59. retro_taes_59 85.54 % 77.57 % ORF
60. retro_taes_60 92.07 % 90.11 % ORF
61. retro_taes_61 71.98 % 74.29 % ORF
62. retro_taes_62 91.81 % 100.00 % ORF
63. retro_taes_63 86.67 % 100.00 % ORF
64. retro_taes_64 72.76 % 61.31 % ORF
65. retro_taes_65 87.30 % 98.44 % ORF
66. retro_taes_66 75.55 % 96.28 % ORF
67. retro_taes_67 80.21 % 62.34 % ORF
68. retro_taes_68 91.51 % 53.94 % ORF
69. retro_taes_69 79.81 % 53.65 % ORF
70. retro_taes_70 62.93 % 99.43 % ORF
71. retro_taes_71 62.20 % 91.01 % ORF
72. retro_taes_72 81.40 % 75.76 % ORF
73. retro_taes_73 67.44 % 64.50 % ORF
74. retro_taes_74 87.10 % 65.49 % ORF
75. retro_taes_75 93.90 % 100.00 % ORF
76. retro_taes_76 76.99 % 99.56 % ORF
77. retro_taes_77 88.81 % 94.13 % ORF
78. retro_taes_78 60.00 % 91.39 % ORF
79. retro_taes_79 96.64 % 87.50 % ORF
80. retro_taes_80 79.26 % 98.54 % ORF
81. retro_taes_81 86.87 % 52.38 % ORF
82. retro_taes_82 80.33 % 68.35 % ORF
83. retro_taes_83 52.84 % 62.41 % ORF
84. retro_taes_84 73.57 % 84.76 % ORF
85. retro_taes_85 68.06 % 85.46 % ORF
86. retro_taes_86 86.15 % 63.72 % ORF
87. retro_taes_87 79.67 % 94.94 % ORF
88. retro_taes_88 79.72 % 74.13 % ORF
89. retro_taes_89 75.82 % 75.96 % ORF
90. retro_taes_90 69.92 % 99.19 % ORF
91. retro_taes_91 88.43 % 70.35 % ORF
92. retro_taes_92 80.65 % 96.57 % ORF
93. retro_taes_93 84.21 % 65.97 % ORF
94. retro_taes_94 82.16 % 69.43 % ORF
95. retro_taes_95 96.99 % 100.00 % ORF
96. retro_taes_96 61.70 % 98.42 % ORF
97. retro_taes_97 89.27 % 52.84 % ORF
98. retro_taes_98 59.55 % 98.61 % ORF
99. retro_taes_100 69.13 % 88.41 % ORF
100. retro_taes_101 64.20 % 51.93 % ORF
101. retro_taes_102 87.75 % 86.29 % ORF
102. retro_taes_103 57.83 % 78.71 % ORF
103. retro_taes_104 70.47 % 88.41 % ORF
104. retro_taes_105 51.46 % 56.74 % ORF
105. retro_taes_106 85.81 % 51.23 % ORF
106. retro_taes_107 59.04 % 78.71 % ORF
107. retro_taes_108 59.75 % 51.13 % ORF
108. retro_taes_109 69.80 % 88.41 % ORF
109. retro_taes_110 51.40 % 73.43 % ORF
110. retro_taes_111 66.20 % 91.56 % ORF
111. retro_taes_112 65.32 % 53.45 % ORF
112. retro_taes_113 69.80 % 88.41 % ORF
113. retro_taes_114 52.78 % 76.98 % ORF
114. retro_taes_115 85.55 % 73.14 % ORF
115. retro_taes_116 85.55 % 73.14 % ORF
116. retro_taes_117 78.38 % 66.79 % ORF
117. retro_taes_118 87.45 % 78.48 % ORF
118. retro_taes_119 65.17 % 62.54 % ORF
119. retro_taes_120 58.08 % 83.58 % ORF
120. retro_taes_122 59.69 % 60.21 % ORF
121. retro_taes_123 59.08 % 90.41 % ORF
122. retro_taes_124 52.17 % 56.74 % ORF
123. retro_taes_125 51.55 % 67.50 % ORF
124. retro_taes_127 62.50 % 50.99 % ORF
125. retro_taes_129 62.42 % 55.36 % ORF
126. retro_taes_130 72.92 % 51.61 % ORF
127. retro_taes_131 88.93 % 59.34 % ORF
128. retro_taes_132 55.67 % 66.19 % ORF
129. retro_taes_133 70.19 % 57.30 % ORF
130. retro_taes_134 53.41 % 72.77 % ORF
131. retro_taes_136 61.78 % 61.57 % ORF
132. retro_taes_138 61.02 % 61.66 % ORF
133. retro_taes_140 59.75 % 62.45 % ORF
134. retro_taes_141 59.22 % 99.04 % ORF
135. retro_taes_143 61.02 % 61.66 % ORF
136. retro_taes_144 55.43 % 58.03 % ORF
137. retro_taes_145 55.43 % 58.03 % ORF
138. retro_taes_146 50.62 % 92.81 % ORF
139. retro_taes_147 60.67 % 80.93 % ORF
140. retro_taes_149 58.72 % 61.95 % ORF
141. retro_taes_150 50.27 % 76.79 % ORF
142. retro_taes_152 70.97 % 55.36 % ORF
143. retro_taes_153 62.28 % 58.42 % ORF
144. retro_taes_154 70.32 % 64.17 % ORF
145. retro_taes_155 70.50 % 61.08 % ORF
146. retro_taes_156 83.21 % 85.62 % ORF
147. retro_taes_157 61.06 % 100.00 % ORF
148. retro_taes_158 74.33 % 62.08 % ORF
149. retro_taes_159 75.70 % 65.43 % ORF
150. retro_taes_160 79.08 % 99.35 % ORF
151. retro_taes_161 57.94 % 78.81 % ORF
152. retro_taes_162 54.22 % 91.01 % ORF
153. retro_taes_163 60.84 % 72.05 % ORF
154. retro_taes_164 60.84 % 72.05 % ORF
155. retro_taes_165 67.38 % 99.68 % ORF
156. retro_taes_166 76.82 % 98.69 % ORF
157. retro_taes_167 58.45 % 73.52 % ORF
158. retro_taes_168 54.20 % 85.74 % ORF
159. retro_taes_169 66.67 % 97.48 % ORF
160. retro_taes_170 73.68 % 63.64 % ORF
161. retro_taes_171 59.12 % 51.13 % ORF
162. retro_taes_172 62.32 % 60.09 % ORF
163. retro_taes_173 66.20 % 91.56 % ORF
164. retro_taes_174 61.92 % 95.80 % ORF
165. retro_taes_175 50.30 % 76.35 % ORF
166. retro_taes_176 66.14 % 84.80 % ORF
167. retro_taes_177 59.69 % 98.44 % ORF
168. retro_taes_178 56.51 % 86.63 % ORF
169. retro_taes_179 51.47 % 63.98 % ORF
170. retro_taes_180 68.70 % 99.24 % ORF
171. retro_taes_181 55.14 % 74.31 % ORF
172. retro_taes_182 61.92 % 95.80 % ORF
173. retro_taes_183 61.92 % 95.80 % ORF
174. retro_taes_185 87.75 % 86.29 % ORF
175. retro_taes_186 88.52 % 94.57 % ORF
176. retro_taes_187 68.47 % 69.69 % ORF
177. retro_taes_189 52.13 % 64.18 % ORF
178. retro_taes_190 52.38 % 64.18 % ORF
179. retro_taes_192 53.47 % 65.78 % ORF
180. retro_taes_193 55.99 % 92.44 % ORF
181. retro_taes_194 59.32 % 74.03 % ORF
182. retro_taes_195 57.61 % 61.89 % ORF
183. retro_taes_196 55.81 % 93.30 % ORF
184. retro_taes_197 60.24 % 56.32 % ORF
185. retro_taes_198 63.11 % 91.08 % ORF
186. retro_taes_199 69.84 % 67.74 % ORF
187. retro_taes_201 70.19 % 57.30 % ORF
188. retro_taes_202 67.94 % 56.71 % ORF
189. retro_taes_203 67.94 % 56.71 % ORF
190. retro_taes_204 57.87 % 62.99 % ORF
191. retro_taes_206 89.03 % 65.13 % ORF
192. retro_taes_207 60.71 % 75.97 % ORF
193. retro_taes_209 54.20 % 85.74 % ORF
194. retro_taes_215 70.91 % 97.70 % ORF
195. retro_taes_216 58.26 % 70.21 % ORF
196. retro_taes_217 70.91 % 97.70 % ORF
197. retro_taes_218 62.86 % 62.06 % ORF
198. retro_taes_220 69.84 % 67.74 % ORF
199. retro_taes_221 69.84 % 67.74 % ORF
200. retro_taes_222 69.84 % 67.74 % ORF
201. retro_taes_223 69.84 % 67.74 % ORF
202. retro_taes_225 59.90 % 99.52 % ORF
203. retro_taes_226 69.73 % 77.11 % ORF
204. retro_taes_227 70.51 % 64.38 % ORF
# Ensembl ID Symbol Description
1. Traes_6BS_E323ECAC1
2. Traes_5DS_2145F8A9E
3. Traes_2BL_97DB34EF2
4. Traes_6DL_FD8A6A45F GroES-like zinc-binding dehydrogenase family protein [Source:Projected from Arabidopsis thaliana (AT5G43940) TAIR;Acc:AT5G43940]
5. Traes_5BL_DA5693099
6. Traes_5BL_8FFD203BD Ubiquitin [Source:UniProtKB/Swiss-Prot;Acc:P69326]
7. Traes_5DL_DEAE3B117
8. Traes_6AS_A34A8593D aldehyde dehydrogenase 5F1 [Source:Projected from Arabidopsis thaliana (AT1G79440) TAIR;Acc:AT1G79440]
9. Traes_7DS_A07A7A4F0
10. Traes_2BL_201961401
11. Traes_5BL_8D494D60C
12. Traes_6BL_22515EB16
13. Traes_4DL_0D0BF450D
14. Traes_7DL_961822B36
15. Traes_5DL_BB10A3B4B
16. Traes_5AL_6F55F4E44
17. Traes_3AL_61AEDEA78
18. TRAES3BF058700080CFD_g
19. Traes_7BL_FE6ED9DF9
20. Traes_2BS_4304B3EDD
21. Traes_2BS_466607233
22. Traes_2AL_80D15B4FB
23. TRAES3BF101300010CFD_g
24. TRAES3BF073500010CFD_g
25. TRAES3BF026200060CFD_g
26. Traes_7DS_01A0AF589
27. Traes_1DL_84C83461E
28. Traes_4DL_D26869D79
29. TRAES3BF092800020CFD_g
30. Traes_4DS_8ED58C477
31. Traes_2DS_5AA2EEDB7
32. Traes_7DS_620E0D488
33. Traes_3AS_D41508CC4
34. Traes_5BL_25853B117
35. Traes_4DL_21C202E37
36. Traes_2AL_81CA86DFC
37. TRAES3BF099200050CFD_g
38. Traes_7AS_26CAC27FF
39. Traes_4DL_B0BD66142
40. Traes_2AS_1475F8BDB PETC Cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7X9A6]
41. Traes_2DS_46C9F8F5F
42. Traes_7DS_309E71F44
43. Traes_2BS_C7E82EE7A photosystem II reaction center PSB29 protein [Source:Projected from Arabidopsis thaliana (AT2G20890) TAIR;Acc:AT2G20890]
44. Traes_3DL_E7983BF89
45. Traes_6DL_F16253948
46. Traes_5BL_DBB9A8546 RING/U-box superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G05250) TAIR;Acc:AT3G05250]
47. Traes_2BS_7DF366FE1
48. Traes_2AL_1B2CC9926 Ribosomal protein S8e family protein [Source:Projected from Arabidopsis thaliana (AT5G59240) TAIR;Acc:AT5G59240]
49. Traes_6AL_CDC715B50
50. Traes_1AL_287433591 urease accessory protein G [Source:Projected from Arabidopsis thaliana (AT2G34470) TAIR;Acc:AT2G34470]
51. Traes_1BL_7F667EEA3 ras-related nuclear protein 4 [Source:Projected from Arabidopsis thaliana (AT5G55080) TAIR;Acc:AT5G55080]
52. TRAES3BF136000090CFD_g
53. Traes_5DL_82E82F8F9
54. TRAES3BF080300020CFD_g
55. Traes_2AS_B86EFFF66 photosystem I light harvesting complex gene 2 [Source:Projected from Arabidopsis thaliana (AT3G61470) TAIR;Acc:AT3G61470]
56. Traes_1AL_B01B26670
57. Traes_7AS_7D66EF3D3
58. Traes_2AL_841CB993F
59. Traes_5AL_2A92E7079
60. TRAES3BF111700140CFD_g
61. TRAES3BF057900160CFD_g
62. Traes_4AL_766B299B11
63. Traes_4AL_CC08ED5AD1
64. TRAES3BF024100040CFD_g
65. Traes_7DS_9FEC6C6E1
66. Traes_4BL_A9FAA75A9
67. Traes_2AS_3EC4D7685
68. Traes_6AS_606F61E8B chloroplast stem-loop binding protein of 41 kDa [Source:Projected from Arabidopsis thaliana (AT3G63140) TAIR;Acc:AT3G63140]
69. Traes_4BS_2B6A67E9F
70. Traes_4AL_59D5504B1
71. Traes_3B_6814689F5
72. Traes_6AS_88F0CBEC0
73. Traes_1AS_70E8717D0 cyclophilin 20-2 [Source:Projected from Arabidopsis thaliana (AT5G13120) TAIR;Acc:AT5G13120]
74. Traes_2DS_B81752301
75. Traes_7BL_BAF53625C
76. Traes_4AL_91A056793
77. Traes_7AS_DD24F4515
78. Traes_3AL_BC81D5BF3
79. Traes_2AL_B1862228D
80. TRAES3BF104000060CFD_g
81. Traes_2BS_F10DFB01C
82. Traes_5AL_AAB4628BD
83. Traes_2AL_F5BCAC94C
84. Traes_1BL_B0F4F6E5C
85. Traes_4AS_C67AE6944 nuclear encoded CLP protease 5 [Source:Projected from Arabidopsis thaliana (AT1G02560) TAIR;Acc:AT1G02560]
86. Traes_5BL_402FB4A3F succinate dehydrogenase 2-3 [Source:Projected from Arabidopsis thaliana (AT5G65165) TAIR;Acc:AT5G65165]
87. TRAES3BF098800030CFD_g
88. Traes_1BS_9E2358A6E
89. Traes_2AL_D3D671F67
90. Traes_1AS_DD0497955
91. Traes_6AS_D1274A812
92. Traes_3AS_719D37CCA
93. TRAES3BF060500390CFD_g
94. TRAES3BF072500070CFD_g
95. Traes_4BL_4CC0E0AAA
96. Traes_4DL_350C0974E
97. Traes_2BL_BB2C0F695
98. Traes_6BS_763DBF311
99. Traes_4BL_58C01D20F
100. TRAES3BF107900020CFD_g
101. Traes_1AL_DF31196A4
102. Traes_6DS_A593093E1
103. Traes_6DS_F8BA09F24
104. TRAES3BF024300050CFD_g
105. Traes_2DS_D8DC6D0D3
106. TRAES3BF069100050CFD_g
107. Traes_6DL_237C26703 oxidoreductase, zinc-binding dehydrogenase family protein [Source:Projected from Arabidopsis thaliana (AT4G21580) TAIR;Acc:AT4G21580]
108. TRAES3BF249900010CFD_g
109. Traes_7BL_F7E745685
110. TRAES3BF010600070CFD_g
111. Traes_4BS_D12DBE6D3
112. TRAES3BF035100020CFD_g
113. Traes_1BS_FE41536F4
114. TRAES3BF044200210CFD_g Chlorophyll A-B binding family protein [Source:Projected from Arabidopsis thaliana (AT1G44575) TAIR;Acc:AT1G44575]
115. Traes_7DL_98846F89F1
116. Traes_3AS_9A8B4C51B metallothionein 3 [Source:Projected from Arabidopsis thaliana (AT3G15353) TAIR;Acc:AT3G15353]
117. Traes_4DL_909858768
118. Traes_2DL_3B4943F11
119. Traes_5BL_DBC5D12AB light-harvesting chlorophyll-protein complex I subunit A4 [Source:Projected from Arabidopsis thaliana (AT3G47470) TAIR;Acc:AT3G47470]
120. Traes_7DL_B73A0C80B
121. TRAES3BF142500040CFD_g Sedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46285]
122. Traes_2DS_31FE2B248
123. TRAES3BF026200050CFD_g
124. Traes_4AL_5BD269FF3
125. Traes_7AS_DC51A1D61 photosystem I light harvesting complex gene 1 [Source:Projected from Arabidopsis thaliana (AT3G54890) TAIR;Acc:AT3G54890]
126. Traes_7DL_41F6E8FC4
127. Traes_6AL_70042AA23
128. Traes_2BL_2768AE3B1
129. Traes_6DS_7FDD8343D
130. Traes_4AS_90C3255FC
131. Traes_2DL_8EF06D1FA
132. Traes_5BL_2BCCF6926
133. Traes_5AL_31CDB68F2
134. Traes_3AL_340F1516D
135. Traes_6BL_302923E6D
136. Traes_5BS_4D44AE9D6 chloroplast RNA binding [Source:Projected from Arabidopsis thaliana (AT1G09340) TAIR;Acc:AT1G09340]
137. Traes_7DS_23781E457
138. Traes_7BS_586D1E6FD
139. Traes_4AS_34072BFC9
140. Traes_4DS_CC9F9317E
141. Traes_2BL_8706FBCEF
142. Traes_6DL_0FF72D765
143. Traes_2AL_C51BB91CC
144. Traes_7DS_5458757D9
145. Traes_1AL_0C964B45F TUBA Tubulin alpha chain [Source:UniProtKB/Swiss-Prot;Acc:Q9ZRB7]
146. Traes_2BL_6552196A1
147. Traes_4AL_060131441
148. Traes_5DL_11F618A4D
149. Traes_2AL_52D3F9AF41
150. Traes_5BL_4FE938B74
151. Traes_2BL_AFF8E770F
152. Traes_4AL_4A747B462 poly(A) polymerase 1 [Source:Projected from Arabidopsis thaliana (AT1G17980) TAIR;Acc:AT1G17980]
153. Traes_1BL_8DB775116
154. Traes_2BL_38EEB8C0B
155. Traes_2AS_E714D8C86
Retrogenes FASTA BED
TSV (download all or selected columns from MySQL table)
Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)