RetrogeneDB ID: | retro_tbel_1036 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3631:36765..37121(+) | ||
Located in intron of: | ENSTBEG00000012314 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CCDC53 | ||
Ensembl ID: | ENSTBEG00000008498 | ||
Aliases: | None | ||
Description: | coiled-coil domain containing 53 [Source:HGNC Symbol;Acc:24256] |
Percent Identity: | 90. % |
Parental protein coverage: | 66.48 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LSSIPGLDNVTLEVSPLSVTSVTNGSYSEATSEQSQQNSTQDSGQQESEVSAENILTVAKDPRYAR-YLK |
LSSIPGLDNVTLEVSPLSVTSVT.GSY.EATSEQS.QNSTQDSGQQESEVS.ENIL.VAKDPRYAR.YLK | |
Retrocopy | LSSIPGLDNVTLEVSPLSVTSVTSGSYFEATSEQSLQNSTQDSGQQESEVSTENILSVAKDPRYAR>YLK |
Parental | MVQVGV-VMAIRNKMISEGLDPDLLERPDAPVPDGEIE-KTTEESSDSES |
MVQVGV.VMAIRNKMISEGLDPDLLERPDAPVPD...E.KTTEESSDS.S | |
Retrocopy | MVQVGVPVMAIRNKMISEGLDPDLLERPDAPVPDDKTE>KTTEESSDSRS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |