RetrogeneDB ID: | retro_tbel_4443 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_83647:6982..7283(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2B | ||
Ensembl ID: | ENSTBEG00000010294 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2B [Source:HGNC Symbol;Acc:12473] |
Percent Identity: | 86.14 % |
Parental protein coverage: | 65.33 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDI-QNRWS |
PSE.NIMQWNAVIFGPEGTPFEDGTFKLV.EFSE.YPNKPPTVR.L.KMFHPNVYADGS.CLDI.QNRWS | |
Retrocopy | PSEKNIMQWNAVIFGPEGTPFEDGTFKLVTEFSEDYPNKPPTVRILCKMFHPNVYADGSVCLDILQNRWS |
Parental | PTYDV-SS-IITSIQSLLDEPNPNSPANSQA |
PT.DV.SS.I.TSIQSLLDEP.PNSPA..QA | |
Retrocopy | PTHDV>SSSISTSIQSLLDEPKPNSPAKNQA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |