RetrogeneDB ID: | retro_tbel_61 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_4307:75163..75808(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000009691 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000003734 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 95.69 % |
Parental protein coverage: | 92.89 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AQAYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARIWANKY |
A..YRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARI.ANKY | |
Retrocopy | ARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKY |
Parental | MVKSCGKDGFHIRVRLHPFHVIRINKMLSCXXXXXLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNK |
MVKSCGKDGFHIRVRLHPFHVIRINKMLSC.....LQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNK | |
Retrocopy | MVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNK |
Parental | EHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPLDKWRALHS |
EHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA.KRLIPDGCGVKYIPNRGPLDKWRALHS | |
Retrocopy | EHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKRLIPDGCGVKYIPNRGPLDKWRALHS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000004369 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000001712 | 10 retrocopies | |
Gorilla gorilla | ENSGGOG00000000131 | 4 retrocopies | |
Macropus eugenii | ENSMEUG00000013163 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000005494 | 5 retrocopies | |
Monodelphis domestica | ENSMODG00000008731 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000003734 | 1 retrocopy |
retro_tbel_61 ,
|
Tarsius syrichta | ENSTSYG00000004067 | 7 retrocopies | |
Tursiops truncatus | ENSTTRG00000011407 | 7 retrocopies |