Parental gene:

ENSMODG00000008731

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:X:3165121..3169073(+)


>ENSMODG00000008731
ATGGGCCGTCGTCCCGCCCGCTGTTACAGGTACTGTAAAAACAAGCCGTACCCCAAGTCCCGTTTCTGCAGGGGAGTTCC
CGATGCCAAAATCCGAATTTTTGATCTTGGGAGGAAGAAAGCAAAAGTGGACGAGTTTCCACTGTGTGGCCACATGGTGT
CTGATGAGTACGAACAGCTGTCATCTGAAGCCTTGGAAGCAGCTCGCATCTGTGCCAACAAGTACATGGTGAAGAGCTGT
GGCAAGGATGGCTTCCATATTCGTGTGCGCCTCCACCCTTTTCATGTCATCCGCATCAATAAGATGCTGTCATGTGCTGG
GGCTGATAGGCTCCAGACTGGCATGCGGGGGGCCTTTGGGAAGCCCCAGGGCACTGTAGCCCGTGTCCACATTGGCCAGG
TTATCATGTCCATTAGGACCAAGGTCCAGAACAAAGAACATGTGATTGAAGCTTTGCGGAGAGCTAAGTTCAAGTTCCCT
GGCCGCCAAAAGATCCATATCTCCAAGAAATGGGGTTTCACCAAGTTCAATGCCGATCAGTTTGAGGATATGATCTCCGA
GAAGCGGCTCATTCCTGATGGCTGTGGGGTCAAATACATCCCTAACCGAGGCCCCCTGGACAAGTGGCGCGCGCTCCACT
CCTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007454 possible_ortholog 2 retrogenes
retro_btau_140, retro_btau_99,
Callithrix jacchus ENSCJAG00000011822 possible_ortholog 5 retrogenes
retro_cjac_156, retro_cjac_174, retro_cjac_260, retro_cjac_277, retro_cjac_61,
Cavia porcellus ENSCPOG00000002355 possible_ortholog 1 retrogene
retro_cpor_64,
Dipodomys ordii ENSDORG00000004369 possible_ortholog 2 retrogenes
retro_dord_14, retro_dord_715,
Equus caballus ENSECAG00000017154 possible_ortholog 1 retrogene
retro_ecab_113,
Echinops telfairi ENSETEG00000001712 possible_ortholog 10 retrogenes
retro_etel_1073, retro_etel_1284, retro_etel_1517, retro_etel_1654, retro_etel_249, retro_etel_338, retro_etel_403, retro_etel_47, retro_etel_538, retro_etel_631,
Felis catus ENSFCAG00000011395 possible_ortholog 1 retrogene
retro_fcat_81,
Homo sapiens ENSG00000147403 possible_ortholog 3 retrogenes
retro_hsap_2030, retro_hsap_3265, retro_hsap_3437,
Gorilla gorilla ENSGGOG00000000131 possible_ortholog 4 retrogenes
retro_ggor_1873, retro_ggor_2425, retro_ggor_253, retro_ggor_61,
Loxodonta africana ENSLAFG00000031860 possible_ortholog 1 retrogene
retro_lafr_616,
Macropus eugenii ENSMEUG00000013163 possible_ortholog 3 retrogenes
retro_meug_1839, retro_meug_5, retro_meug_547,
Microcebus murinus ENSMICG00000004658 possible_ortholog 2 retrogenes
retro_mmur_1077, retro_mmur_4,
Myotis lucifugus ENSMLUG00000014337 possible_ortholog 3 retrogenes
retro_mluc_1592, retro_mluc_191, retro_mluc_275,
Macaca mulatta ENSMMUG00000005494 possible_ortholog 5 retrogenes
retro_mmul_1506, retro_mmul_1654, retro_mmul_307, retro_mmul_335, retro_mmul_906,
Mustela putorius furo ENSMPUG00000009320 possible_ortholog 3 retrogenes
retro_mputfur_1405, retro_mputfur_54, retro_mputfur_84,
Mus musculus ENSMUSG00000008682 possible_ortholog 1 retrogene
retro_mmus_71,
Oryctolagus cuniculus ENSOCUG00000015919 possible_ortholog 2 retrogenes
retro_ocun_107, retro_ocun_147,
Otolemur garnettii ENSOGAG00000000099 possible_ortholog 3 retrogenes
retro_ogar_293, retro_ogar_2995, retro_ogar_3284,
Pongo abelii ENSPPYG00000020874 possible_ortholog 5 retrogenes
retro_pabe_173, retro_pabe_1854, retro_pabe_2036, retro_pabe_2843, retro_pabe_2955,
Rattus norvegicus ENSRNOG00000027149 possible_ortholog 5 retrogenes
retro_rnor_1007, retro_rnor_1090, retro_rnor_270, retro_rnor_2998, retro_rnor_482,
Sorex araneus ENSSARG00000012256 possible_ortholog 1 retrogene
retro_sara_2,
Ictidomys tridecemlineatus ENSSTOG00000011857 possible_ortholog 2 retrogenes
retro_itri_174, retro_itri_506,
Tupaia belangeri ENSTBEG00000003734 possible_ortholog 1 retrogene
retro_tbel_61,
Tarsius syrichta ENSTSYG00000004067 possible_ortholog 7 retrogenes
retro_tsyr_11, retro_tsyr_1644, retro_tsyr_1739, retro_tsyr_1986, retro_tsyr_559, retro_tsyr_640, retro_tsyr_960,
Tursiops truncatus ENSTTRG00000011407 possible_ortholog 7 retrogenes
retro_ttru_1085, retro_ttru_122, retro_ttru_1226, retro_ttru_1437, retro_ttru_820, retro_ttru_858, retro_ttru_867,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_177 92.06 100.00
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2. retro_mdom_829 91.05 88.79
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Download FASTA sequences of all ENSMODG00000008731 retrocopies