RetrogeneDB ID: | retro_ttru_276 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1753:120333..120836(-) | ||
Located in intron of: | ENSTTRG00000016652 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HPRT1 | ||
Ensembl ID: | ENSTTRG00000009954 | ||
Aliases: | None | ||
Description: | hypoxanthine phosphoribosyltransferase 1 [Source:HGNC Symbol;Acc:5157] |
Percent Identity: | 92.31 % |
Parental protein coverage: | 80.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | ISDDEPGYDLDLFCIPNHYAEDLEKVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLL |
ISDD.PGYDLDLFCIPNHYAEDLEKVFIPHGLIMDRTE.LARDVMKEMGGHHIVALCVL.GGYKFFADLL | |
Retrocopy | ISDDAPGYDLDLFCIPNHYAEDLEKVFIPHGLIMDRTE*LARDVMKEMGGHHIVALCVLSGGYKFFADLL |
Parental | DYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGD-DLSTLTGKNVLIVEDIIDTGKTMQTLLS |
DYIKALNR.SDRSIP.TVDFIRLKSY.NDQSTGDIKVIGGD..LSTLTGKNVLIVE.IIDTGKTMQTLLS | |
Retrocopy | DYIKALNRSSDRSIPVTVDFIRLKSYRNDQSTGDIKVIGGD<YLSTLTGKNVLIVENIIDTGKTMQTLLS |
Parental | LVKQHNPKMVKVASLLVKRTPRSVGYRPD |
LVKQHNPKMVKV..LLVKRTP..VGYRPD | |
Retrocopy | LVKQHNPKMVKVTGLLVKRTPQCVGYRPD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |