Parental gene: | HPRT1, ENSDNOG00000008495 |
| Aliases: | None |
| Description: | hypoxanthine phosphoribosyltransferase 1 [Source:HGNC Symbol;Acc:5157] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_5250:25272..53207(+) |
>ENSDNOG00000008495
ATTAGCGATGATGAACCAGGTTATGACCTAAATTTATTTTGTATACCTAATCATTATGCTGAAGATTTGGAAAGGGTATT
TATTCCTCATGGACTAATTATGGACAGAACTGAACGGCTTGCTCGAGATGTGATGAAGGAGATGGGAGGCCATCACATCG
TAGCCCTCTGTGTGCTCAAGGGGGGCTATAAATTCTTTGCCGACTTACTGGATTACATCAAAGCACTGAACAGAAATAGC
GATAGATCCATTCCTATGACTGTAGATTTTATCAGACTAAAGAGCTACTGTAATGACCAGTCAACAGGAGACATAAAAGT
GATTGGTGGAGATGATCTCTCAACTTTAACTGGAAAGNNNNNNNNNNNNNNNNNNGATATAATTGACACTGGCAAAACAA
TGCAAACCCTGCTTTCCTTGGTCAAGCAGTATAATCCAAAGATGGTCAAGGTTGCAAGCTTACTGGTGAAAAGGACCCCT
CGAAGTGTTGGATATAGACCAGACTTTGTTGGGTTTGAAATTCCAGACAAGTTTGTTGTAGGATATGCCCTTGACTATAA
TGAATACTTCAGGGATTTGAATCATGTTTGTGTCATTAGCGAAACTGGAAAAGCAAAATACAAAGCCTGA
ATTAGCGATGATGAACCAGGTTATGACCTAAATTTATTTTGTATACCTAATCATTATGCTGAAGATTTGGAAAGGGTATT
TATTCCTCATGGACTAATTATGGACAGAACTGAACGGCTTGCTCGAGATGTGATGAAGGAGATGGGAGGCCATCACATCG
TAGCCCTCTGTGTGCTCAAGGGGGGCTATAAATTCTTTGCCGACTTACTGGATTACATCAAAGCACTGAACAGAAATAGC
GATAGATCCATTCCTATGACTGTAGATTTTATCAGACTAAAGAGCTACTGTAATGACCAGTCAACAGGAGACATAAAAGT
GATTGGTGGAGATGATCTCTCAACTTTAACTGGAAAGNNNNNNNNNNNNNNNNNNGATATAATTGACACTGGCAAAACAA
TGCAAACCCTGCTTTCCTTGGTCAAGCAGTATAATCCAAAGATGGTCAAGGTTGCAAGCTTACTGGTGAAAAGGACCCCT
CGAAGTGTTGGATATAGACCAGACTTTGTTGGGTTTGAAATTCCAGACAAGTTTGTTGTAGGATATGCCCTTGACTATAA
TGAATACTTCAGGGATTTGAATCATGTTTGTGTCATTAGCGAAACTGGAAAAGCAAAATACAAAGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 9 .14 RPM |
| SRP012922_cerebellum | 24 .06 RPM |
| SRP012922_heart | 12 .99 RPM |
| SRP012922_kidney | 6 .02 RPM |
| SRP012922_liver | 15 .17 RPM |
| SRP012922_lung | 26 .73 RPM |
| SRP012922_quadricep_muscle | 8 .83 RPM |
| SRP012922_spleen | 34 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001339 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000014685 | ortholog_one2many | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000018870 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000002512 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000017534 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000004575 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000165704 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008050 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000009892 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000006547 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003591 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008303 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012699 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003186 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003881 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000020733 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000022287 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000031367 | ortholog_one2many | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000007965 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000859 | ortholog_one2one | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009579 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009954 | ortholog_one2one | 9 retrogenes | |
| Vicugna pacos | ENSVPAG00000009133 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_255 | 91.43 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_763 | 79.21 | 95.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1480 | 62.76 | 66.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1908 | 75.50 | 95.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2057 | 89.35 | 80.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000008495 retrocopies