RetrogeneDB ID: | retro_zmay_44 | ||
Retrocopylocation | Organism: | Maize (Zea mays) | |
Coordinates: | 10:132061474..132061678(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | GRMZM2G703445 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.86 % |
Parental protein coverage: | 73.68 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | NGNRVKEPMDPLYHQAKHHHRSCTGMETMDLLHHHIQIYQICIHRDHNMGMDKFPLHRSITISMTDWINI |
NGN.V.EPMDPL.H.AK.HHRSC.GMETMDLLHHHIQIYQ.CIH.DH.M.MDKFPLHR........WI.I | |
Retrocopy | NGN*VREPMDPLHHRAKYHHRSCMGMETMDLLHHHIQIYQTCIHQDHSMCMDKFPLHRYVSLAL--WISI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Zea mays | GRMZM2G703445 | 2 retrocopies |
retro_zmay_35, retro_zmay_44 ,
|