Common name: Maize
Latin name: Zea mays
Genome assembly: AGPv3
All retrocopies: 56
Parental genes: 44

Summary: Number of retrocopies :
Conserved ORF: 38 ORF 18 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_zmay_1 76.20 % 96.09 % ORF
2. retro_zmay_2 67.11 % 52.42 % ORF
3. retro_zmay_3 75.32 % 52.12 % ORF
4. retro_zmay_4 93.89 % 100.00 % ORF
5. retro_zmay_5 100.00 % 100.00 % ORF
6. retro_zmay_6 66.75 % 86.07 % ORF
7. retro_zmay_7 71.45 % 86.94 % ORF
8. retro_zmay_8 61.87 % 57.68 % ORF
9. retro_zmay_9 71.00 % 80.77 % ORF
10. retro_zmay_10 51.42 % 90.67 % ORF
11. retro_zmay_11 53.49 % 84.70 % ORF
12. retro_zmay_12 80.76 % 99.34 % ORF
13. retro_zmay_13 55.30 % 85.65 % ORF
14. retro_zmay_14 58.23 % 82.39 % ORF
15. retro_zmay_15 64.50 % 94.46 % ORF
16. retro_zmay_16 53.48 % 59.64 % ORF
17. retro_zmay_17 94.55 % 65.22 % ORF
18. retro_zmay_18 60.94 % 59.97 % ORF
19. retro_zmay_19 79.46 % 100.00 % ORF
20. retro_zmay_20 74.11 % 88.79 % ORF
21. retro_zmay_21 61.17 % 87.22 % ORF
22. retro_zmay_22 77.21 % 93.45 % ORF
23. retro_zmay_23 59.81 % 87.34 % ORF
24. retro_zmay_24 56.80 % 55.25 % ORF
25. retro_zmay_25 73.80 % 99.05 % ORF
26. retro_zmay_26 64.49 % 96.24 % ORF
27. retro_zmay_27 66.16 % 96.99 % ORF
28. retro_zmay_28 59.24 % 90.23 % ORF
29. retro_zmay_29 57.77 % 94.31 % ORF
30. retro_zmay_31 86.03 % 57.26 % ORF
31. retro_zmay_32 94.69 % 52.37 % ORF
32. retro_zmay_33 88.07 % 68.79 % ORF
33. retro_zmay_35 65.75 % 76.84 % ORF
34. retro_zmay_36 89.47 % 67.86 % ORF
35. retro_zmay_39 71.54 % 68.82 % ORF
36. retro_zmay_40 93.85 % 53.66 % ORF
37. retro_zmay_41 84.36 % 57.66 % ORF
38. retro_zmay_42 87.16 % 68.79 % ORF
39. retro_zmay_44 72.86 % 73.68 % ORF
40. retro_zmay_45 87.32 % 53.52 % ORF
41. retro_zmay_46 87.12 % 82.69 % ORF
42. retro_zmay_49 95.49 % 52.37 % ORF
43. retro_zmay_54 94.02 % 50.36 % ORF
44. retro_zmay_55 58.00 % 63.46 % ORF
45. retro_zmay_57 83.01 % 57.38 % ORF
46. retro_zmay_58 87.32 % 53.52 % ORF
47. retro_zmay_59 73.28 % 68.82 % ORF
48. retro_zmay_60 68.46 % 68.82 % ORF
49. retro_zmay_61 88.07 % 68.79 % ORF
50. retro_zmay_63 94.55 % 78.38 % ORF
51. retro_zmay_66 56.06 % 82.69 % ORF
52. retro_zmay_69 89.47 % 67.86 % ORF
53. retro_zmay_72 83.33 % 62.75 % ORF
54. retro_zmay_77 86.78 % 57.08 % ORF
55. retro_zmay_79 86.62 % 100.00 % ORF
56. retro_zmay_87 77.54 % 97.87 % ORF
# Ensembl ID Symbol Description
1. AC149475.2_FG002
2. GRMZM5G821426
3. GRMZM2G358405
4. GRMZM2G145870
5. GRMZM2G368398
6. GRMZM2G703445
7. GRMZM2G123495
8. GRMZM2G017087 KN-1 Homeotic protein knotted-1 [Source:UniProtKB/Swiss-Prot;Acc:P24345]
9. GRMZM2G013002
10. GRMZM2G068506 Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:Q3SAE4]
11. GRMZM2G105644
12. GRMZM2G040513 TPR domain containing protein [Source:UniProtKB/TrEMBL;Acc:B6SU80]
13. GRMZM2G093032
14. GRMZM2G007475
15. GRMZM2G034668
16. GRMZM2G424205
17. GRMZM2G010468 Putative cytochrome P450 superfamily protein [Source:UniProtKB/TrEMBL;Acc:K7VNX5]
18. GRMZM2G006964
19. GRMZM2G108919 Polyadenylate-binding protein 2 [Source:UniProtKB/TrEMBL;Acc:B6T3R4]
20. GRMZM2G099765
21. GRMZM2G109009
22. GRMZM2G010348 Cytochrome c [Source:UniProtKB/Swiss-Prot;Acc:P00056]
23. GRMZM2G023037 Cyclic nucleotide-gated ion channel 9 [Source:UniProtKB/TrEMBL;Acc:B6ST31]
24. AC148152.3_FG005 1-aminocyclopropane-1-carboxylate oxidase [Source:UniProtKB/TrEMBL;Acc:B6TBU1]
25. GRMZM2G006526
26. GRMZM2G031138
27. GRMZM2G075290
28. GRMZM2G382557
29. GRMZM2G063060
30. GRMZM2G146818
31. GRMZM2G010315 actin-related protein 5 [Source:Projected from Arabidopsis thaliana (AT3G12380) TAIR;Acc:AT3G12380]
32. GRMZM2G087186 Pyruvate decarboxylase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q05327]
33. GRMZM2G374030
34. GRMZM2G066358
35. AC199541.4_FG004
36. GRMZM2G009136 Annexin [Source:UniProtKB/TrEMBL;Acc:B4FY63]
37. GRMZM2G142502
38. GRMZM2G043275
39. GRMZM2G019872 NADP-dependent oxidoreductase P2; Putative alcohol dehydrogenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:B6SSU0]
40. GRMZM2G150319
41. GRMZM2G035134 Phosphoethanolamine/phosphocholine phosphatase [Source:UniProtKB/TrEMBL;Acc:B6SZW9]
42. GRMZM2G014914 PIP2-1 Aquaporin PIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84RL7]
43. GRMZM5G804893 NFY2 Nuclear transcription factor Y subunit B [Source:UniProtKB/Swiss-Prot;Acc:P25209]
44. GRMZM2G160069
Retrogenes FASTA BED
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Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)