Parental gene:

AT3G47590

Aliases:None
Description:alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT3G47590]
Organism:Mouse-ear cress (Arabidopsis thaliana)
Coordinates:3:17535758..17537530(-)


>AT3G47590
ATGAGAACTCTTTTGCACAACTTCAATTTTGTCCCTCAAGATTCTCCTTATTACAAAACGTCCCCTTTTCCCACATCATC
CTTCTTCAACGTTCGCTTTCCCATCAAGAACAACCAAATCTCTTGTAACAAAGCAAAGAATTTGAGAATGGATCCGTCTA
AGGGAATCCAAGAACAGAGGATTGTGATTCCAAACAGACACAACGAGAAGCTGGTTGGTCTGCTTCATGAAACTGGTTCT
ACAGACATCGTAGTCTTGTGCCATGGCTTTCGATCAAACAAGAGTAACCAAATAATGAATAATGTGGCTGCTGCTATACA
GAAAGAAGGGATCAGCGCTTTTCGTTTTGATTTCTCCGGGAATGGAGAGAGTGAAGGCAGTTTCTATTATGGTAACTATA
ACCATGAAGCTGATGATTTACATTCTGTTGTCCAATACTTCTCTAACAAGAACCGTGTGGTTCCTATAATCCTCGGTCAC
AGTAAGGGAGGTGATGTTGTCCTCCTCTACGCCTCCAAGTATCATGATGTCCGCAATGTAATCAATCTCTCGGGACGTTA
TGATCTTAAAAAGGGTATAAGAGAGCGTCTTGGAGAAGATTTTTTGGAAAGAATTAAGCAACAAGGATTCATCGATGTTG
GAGATGGAAAATCGGGGTATCGTGTTACTGAGAAGAGCTTAATGGACAGGTTAAGCACTGATATTCATGAAGCTTGCCTC
AAGATTGACAAAGAGTGCAGGGTCTTGACGGTTCATGGATCGGAGGACGAGGTAATACCTGTGGAAGATGCGAAGGAGTT
TGCGAAGATCATACCAAACCACAAGCTGGAGATTGTGGAAGGAGCTAATCATGGTTATACTGAGCACCAAAGTCAATTAG
TTTCAACAGTTATGGAGTTCATAAAGACAGTCATTGTGAAGAACAACTAG

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA001352 ortholog_many2many 1 retrogene
retro_oind_81,
Brassica rapa Bra019508 ortholog_one2one 1 retrogene
retro_brap_47,
Hordeum vulgare MLOC_20645 ortholog_many2many 1 retrogene
retro_hvul_20,
Oryza sativa japonica OS01G0579900 ortholog_many2many 1 retrogene
retro_osat_70,
Populus trichocarpa POPTR_0018s06860 ortholog_many2many 1 retrogene
retro_ptri_17,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_atha_5 69.41 80.91
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Download FASTA sequences of all AT3G47590 retrocopies