Parental gene:

Bra019508

Aliases:None
Description:AT3G47590 (E=7e-126) | esterase/lipase/thioesterase family protein
Organism:Chinese cabbage (Brassica rapa)
Coordinates:A06:12716407..12717662(+)


>Bra019508
ATGGACTCGTCTGAGAAAAGTTCAGCTCAGAGGATCGTGATTCCGAACAGACACAAGGAGAAGCTCGTGGGTCTGCTTCA
CGAAACTGGGTCAAGAGAAGTTGTGATCTTGTGCCATGGGTTTCAATCAAACAAGGATAACCAAACTATGAACAATGTGG
CTGCTACTTTAGAGAAAGAAGGCATCACTGCTTTCCGTTTTGATTTCTCTGGGAATGGAGAGAGTGAAGGCAGTTTCTAT
TATGGTAACTATAACCATGAAGCTGATGATCTACGTTCTGTTGTCCAACACTTCTCTAACATGGACCGTGTGGTTCATGT
TGTTCTCGGCCACAGTAAAGGAGGTGATGTGGTGCTCCTTTATGCCTCCAAGTATCACGATATCCGCAATGTAATCAATC
TCTCTGGACGTTATGATCTGAAGAAAGGCATTACAGAGCGTCTTGGGGAAGATTTTTTGGAAACAATTAAGCAACAAGGG
TTCATCGATGTTAAAGATGGAAAATCAGGGTACCGTGTTACTGAGGAGAGCTTAATGGAGAGGTTGAGCACTGATATGCA
TGAAGCTTGCCTCAAGATTGACAAAGAATGCAGGGGTTTGACGGTTCATGGGTCGGATGATGAGGTAACACCCGTGGAAG
ATGCCAAGGAGTTTGCCAAGATCATACCGAACCACAAGCTGACAATTGTGGAGGGAGCTGATCATTGTTATACCAAACAT
CAAACCCAGTTGGTTGCAACAATTACTGAGTTCATTAAGACAGTCATTCTGAAGAACAACTAG

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT3G47590 ortholog_one2one 1 retrogene
retro_atha_5,
Oryza sativa indica BGIOSGA001352 ortholog_many2many 1 retrogene
retro_oind_81,
Hordeum vulgare MLOC_20645 ortholog_many2many 1 retrogene
retro_hvul_20,
Oryza sativa japonica OS01G0579900 ortholog_many2many 1 retrogene
retro_osat_70,
Populus trichocarpa POPTR_0018s06860 ortholog_many2many 1 retrogene
retro_ptri_17,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_brap_47 73.15 55.77
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Download FASTA sequences of all Bra019508 retrocopies