Parental gene: | BGIOSGA017925 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. indica (Oryza sativa indica) |
| Coordinates: | 5:23820017..23821548(-) |
>BGIOSGA017925
ATGGCCGCCGAGATCTGCCGCGAGGAGGCGGCCAAGTCGATGCCGGCTGCGGCGGCCGGCGCCACGGCGATCGCCAGGCG
GCGCCGTAGGGTGGAGGGCTTCCGCTTTGCGGCCGGCTCTCTCGAGCCGCCGCAGGAGGATGCTGACGCCGGTGTGGCGC
GCTGCGGCAAGCGGCAGAGGGTGGCGGGCGCGCGTGCGGGCGCAGGCGCGGCGACCGCAGGCCCGTGCCGTCCGTCGGCC
GGCGCGGGTTTCGGGTCCAGGTGGTGGCCGAGGTACGGCGTCACCTCCGTGTTCGGCCGGCGGCGCGAGATGGAGGACGC
CGTGTCCATCAGGCCGGACTTCCTGCGGGGCTCCACCTCTTCCGGCAAGCACCACTTCTTCGGCGTCTTTGACGGCCATG
GTTGCTCCCATGTCGCGAGGATGTGCCAGGACCGGATGCATGAGCTCGTCGTCGACGCGTACAAGAAGGCGGTCTCCGGC
AAGGAGGCGGCGGCGGCGGCACCGGCGTGGAAGGACGTCATGGAGAAAGGGTTCGCGCGGATGGACGATGAGGCGACGAT
CTGGGCCAAGAGCCGCACCGGCGGTGAGCCGGCCTGCCGCTGCGAGCTGCAGACGCCAGCACGGTGCGACCACGTGGGCT
CGACCGCCGTTGTCGCGGTCGTCGGTCCTAACCGCGTCGTCGTCGCCAACTCCGGCGACTCCCGTGCCGTCCTCTGCCGC
GCCGGCGTCCCCGTCCCCCTCTCCGTCGACCACAAGCCGGACCGGCCGGACGAGCTGGAGCGCATCAAGGCGGCGGGCGG
CCGCGTCATCTACTGGGACGGCGCCAGGGTGCTCGGCGTCCTCGCCATGTCTCGAGCCATCGGGGACGGCTACCTGAAGC
CGTACGTGACGTCGGAGCCGGAGGTGACGGTGACGGAGCGCGCCGACGACGATGAGTGCCTGATCCTGGCGAGCGACGGG
CTGTGGGACGTGGTGACCAACGAGATGGCGTGCGAGGTCGTCCGGGCGTGCTTCCGGAGCAACGGCCCGCCGTCGCCGCC
GGGATGCTCCCGCCCCAAAGCCGTGCTCCCGCCGCCCGCCGGCGCGTCAGGCGGCGGCGGCGGCGACGCCGTGGTGAAGG
GGGTCGACAAGGCCGAGTCCGACAAGGCGTGCGCCGACGCGGCATTGCTTCTCGCGAAGCTCGCGATCGCCCGGCGGAGC
GCCGACAACGTGAGCGTCGTCATCGTGGATCTCCGCCGGCCGGTGCCGTGA
ATGGCCGCCGAGATCTGCCGCGAGGAGGCGGCCAAGTCGATGCCGGCTGCGGCGGCCGGCGCCACGGCGATCGCCAGGCG
GCGCCGTAGGGTGGAGGGCTTCCGCTTTGCGGCCGGCTCTCTCGAGCCGCCGCAGGAGGATGCTGACGCCGGTGTGGCGC
GCTGCGGCAAGCGGCAGAGGGTGGCGGGCGCGCGTGCGGGCGCAGGCGCGGCGACCGCAGGCCCGTGCCGTCCGTCGGCC
GGCGCGGGTTTCGGGTCCAGGTGGTGGCCGAGGTACGGCGTCACCTCCGTGTTCGGCCGGCGGCGCGAGATGGAGGACGC
CGTGTCCATCAGGCCGGACTTCCTGCGGGGCTCCACCTCTTCCGGCAAGCACCACTTCTTCGGCGTCTTTGACGGCCATG
GTTGCTCCCATGTCGCGAGGATGTGCCAGGACCGGATGCATGAGCTCGTCGTCGACGCGTACAAGAAGGCGGTCTCCGGC
AAGGAGGCGGCGGCGGCGGCACCGGCGTGGAAGGACGTCATGGAGAAAGGGTTCGCGCGGATGGACGATGAGGCGACGAT
CTGGGCCAAGAGCCGCACCGGCGGTGAGCCGGCCTGCCGCTGCGAGCTGCAGACGCCAGCACGGTGCGACCACGTGGGCT
CGACCGCCGTTGTCGCGGTCGTCGGTCCTAACCGCGTCGTCGTCGCCAACTCCGGCGACTCCCGTGCCGTCCTCTGCCGC
GCCGGCGTCCCCGTCCCCCTCTCCGTCGACCACAAGCCGGACCGGCCGGACGAGCTGGAGCGCATCAAGGCGGCGGGCGG
CCGCGTCATCTACTGGGACGGCGCCAGGGTGCTCGGCGTCCTCGCCATGTCTCGAGCCATCGGGGACGGCTACCTGAAGC
CGTACGTGACGTCGGAGCCGGAGGTGACGGTGACGGAGCGCGCCGACGACGATGAGTGCCTGATCCTGGCGAGCGACGGG
CTGTGGGACGTGGTGACCAACGAGATGGCGTGCGAGGTCGTCCGGGCGTGCTTCCGGAGCAACGGCCCGCCGTCGCCGCC
GGGATGCTCCCGCCCCAAAGCCGTGCTCCCGCCGCCCGCCGGCGCGTCAGGCGGCGGCGGCGGCGACGCCGTGGTGAAGG
GGGTCGACAAGGCCGAGTCCGACAAGGCGTGCGCCGACGCGGCATTGCTTCTCGCGAAGCTCGCGATCGCCCGGCGGAGC
GCCGACAACGTGAGCGTCGTCATCGTGGATCTCCGCCGGCCGGTGCCGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza glumaepatula | OGLUM05G20150 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI05G16600 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA05G19940 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA05G0165000 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI05G20280 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oind_21 | 59.66 | 69.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BGIOSGA017925 retrocopies