Parental gene: | SUSD3, ENSACAG00000001297 |
| Aliases: | None |
| Description: | sushi domain containing 3 [Source:HGNC Symbol;Acc:28391] |
| Organism: | Anole lizard (Anolis carolinensis) |
| Coordinates: | GL343225.1:1941304..2006190(-) |
>ENSACAG00000001297
ATGCAAACGGCCACCGCCTCCATCCTCGACGTTTCCCGGACGGTGGTGATCCGCGAGGAGGGCAACCCCGCCCGGAGTAA
CTACACAGGACAATGCAACCAGATATTCGCACCTCACCTTGGCATGTCCGAGATCATCCATGGCAATGGTACCACTGTGG
GCACAGTCATTACTTTTCGGTGTTCTGCAGAACACCAGCTGGTTGGACAAGGAGTTGTCACATGCATTTGGAAAGGCAAT
AGCACCCAGTGGACAGCAGACATCCCTTCATGTAAGCCTATATCCAAATATGAAACCTTTGGGTTTAAAATTGCAGTGAT
TGCCTCCATTGTGAGCTGTGCTATTATTCTGCTGATGTCTATGGCTTTTTTAACCTGCTGTCTCATCAAATGTGTTAAGA
AAAGTGAGAGAAGGAGAGCTCAAAGGGATATGCAACTGTGGTATCAGCTCAGAAGTGAAGAACTGGAAAGCATGCAAGCC
GCTTATTTTGGTTATAAAGGAAGAAATAACAACAACAATAAAAATATCAAGAATAAGGCAGCATTTGACAGGGGCAGTCA
TATGGCATATGATAACCAAGGCTTCTGCAGCTTCCATGAAGAATGCAATGGAGACATTACAGGGACTGAGTGTTATGGAG
AAAATTATTTACAAAGGAATTCAGCCAAAACCATTGGTGCACTTGGTCATCAGTTAGTACCAGGACAAAGTATTGCCTTG
CATACCATCAGTACTATACATGTTGTAGAGGTCTATGGTCATGAAAAAGACGCCCTTGGAACCCTGGATGCTCATTTACC
TGGATATGGGTCCCCAGAAACGCAGTGA
ATGCAAACGGCCACCGCCTCCATCCTCGACGTTTCCCGGACGGTGGTGATCCGCGAGGAGGGCAACCCCGCCCGGAGTAA
CTACACAGGACAATGCAACCAGATATTCGCACCTCACCTTGGCATGTCCGAGATCATCCATGGCAATGGTACCACTGTGG
GCACAGTCATTACTTTTCGGTGTTCTGCAGAACACCAGCTGGTTGGACAAGGAGTTGTCACATGCATTTGGAAAGGCAAT
AGCACCCAGTGGACAGCAGACATCCCTTCATGTAAGCCTATATCCAAATATGAAACCTTTGGGTTTAAAATTGCAGTGAT
TGCCTCCATTGTGAGCTGTGCTATTATTCTGCTGATGTCTATGGCTTTTTTAACCTGCTGTCTCATCAAATGTGTTAAGA
AAAGTGAGAGAAGGAGAGCTCAAAGGGATATGCAACTGTGGTATCAGCTCAGAAGTGAAGAACTGGAAAGCATGCAAGCC
GCTTATTTTGGTTATAAAGGAAGAAATAACAACAACAATAAAAATATCAAGAATAAGGCAGCATTTGACAGGGGCAGTCA
TATGGCATATGATAACCAAGGCTTCTGCAGCTTCCATGAAGAATGCAATGGAGACATTACAGGGACTGAGTGTTATGGAG
AAAATTATTTACAAAGGAATTCAGCCAAAACCATTGGTGCACTTGGTCATCAGTTAGTACCAGGACAAAGTATTGCCTTG
CATACCATCAGTACTATACATGTTGTAGAGGTCTATGGTCATGAAAAAGACGCCCTTGGAACCCTGGATGCTCATTTACC
TGGATATGGGTCCCCAGAAACGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP009831_adrenal | 60 .26 RPM |
| SRP009831_brain | 3 .98 RPM |
| SRP009831_dewlap | 36 .07 RPM |
| SRP009831_embryo | 3 .47 RPM |
| SRP009831_heart | 4 .20 RPM |
| SRP009831_liver | 9 .45 RPM |
| SRP009831_lung | 2 .17 RPM |
| SRP009831_ovary | 27 .37 RPM |
| SRP009831_skeletal_muscle | 0 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ochotona princeps | ENSOPRG00000005344 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016525 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_acar_95 | 72.08 | 70.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSACAG00000001297 retrocopies