Parental gene: | RSPRY1, ENSACAG00000006680 |
| Aliases: | None |
| Description: | None |
| Organism: | Anole lizard (Anolis carolinensis) |
| Coordinates: | GL343677.1:233477..252107(-) |
>ENSACAG00000006680
ATGATTGTCGTCGCTTTTGTGGTGTTCTTTGTGACCAGAAGCCTTCTCCAAGGTTTACGGCAGACTCTTGAGCAGCACGT
TCCCCGGTGGCTGCAAAGCTTGGGAGCCAACAACATGGGCAACTCCTGCGTCTGTCGAGAAGACAGTGGACCGGAAGACA
ACGCGGAATCCAGGAGTCGCCAGGCGGAGAGCAGCAGAGTCCCTGCGCCTGAAACAAGGAGCCATCCGAGGGACCCCGTA
CGGCCTCCCCGTCGGGGACGGGGCCCCCATGAACCCAGGAGGAAAAAACATAACGTGGATGGATTAGTTCTGGACACGCT
GGCGGTCATTCGGACACTTGTCGACAATGATCAGGAACCTCCTTATTCCATGATGACTTTGCATGAAATGGCTGAAACAG
ATGAAGGCTGGCTGGAAGTTGTCCAATCGCTAATTAGGGTTATTCCATTAGAAGATCCCCTGGGACCAGCTGTTATAACG
TTGCTACTGGATGAGTGCCCGTTGCCAACAAAAGATGCATTGCAGAAGTTGACGGAAATCTTAAATTTAAGCGGAGCCGT
TGCGCGCCAGGATGCGTGCCACCCTGCCAAACATCGGAACACCACCGCCGTCCTGGGCTGTTTGGCAGAGAAGCTTGCGG
GTCCTGCAAGTATAGGTTTGCTCAGTGAAGGAATCTTGGAATACTTGCTGCAGAGCTTGGAGTTCCAGTCCCACCCAACA
GTAATGCTTTTTGCACTAATAGCCCTGGAAAAGTTTGCACAAACAAGTGAAAATAAAGTGACTGTTTCCCAGACTTGTAT
CAGCGACCAACTTGTCCTGTTAGAGAAATGGATGGATAATCCGGACTACTTAAAGCGCCAAGTCGGTTTCTGCGCTCAGT
GGAGTTTAGATAACCTGTTTTTGAAAGAAGGCAGGCAGTTTACGTACGAGAAGGTTGACTTGACCCACATTAACGCCATG
CTGAATAGTAACGACGTCAGTGAATACCTTAAGATCTCACCGCACGGGTTGGAGGCCCGGTGCGACGCCTCCTCTTTCGA
AAGCGTCCGGTGCACCTTCTGCGTGGATTCTGGCGTCTGGTATTATGAAGTCACGGTCGTCACGTCCGGCGTGATGCAGA
TCGGGTGGGCTACCAAAGACAGCAAGTTCCTCAATCATGAAGGTTATGGCATCGGGGACGACGAGTACTCCTGCGCATAC
GACGGCTGCCGGCAGCTGATCTGGTATAATGCCAGAAGTAAACCGCACTCCCACCCGTGCTGGAAGGAAGGCTTGGCTGA
AGGTGACACAATAGGATTTTTGCTGGACCTGCAGGACAAGAAGATGGTTTTTTATTTAAACGGGAACCAGCTTCCAGCCG
AGAAGCAAGTCTTTTCTTCTGCTGTGTCTGGCTTCTTTGCTGCGGCGAGTTTCATGTCCTACCAACAGTGCGAGTTCAAC
TTTGGAGCGAAACCTTTCAAATACCCGCCATCCGCTAAATTTAGCACCTTTAACAATTATGCCTTCCTGACAGCAGAAGA
GAAGATCATTTTACCCAGACACAGACGCTTGGCCTTGTTGAAGCAAGTGAGCATCCGAGAAAACTGCTGCACCCTTTGCT
GTGATGAAATAGCCGACACTGAACTCAGGCCGTGTGGACATAGTGACTTGTGCATGGAGTGTGCCTTGCAGCTGGAGACC
TGCCCTTTGTGTCGGCAAGAGATCCAGACCCGGGTCCGACAGATCGCTCACATTTCATGA
ATGATTGTCGTCGCTTTTGTGGTGTTCTTTGTGACCAGAAGCCTTCTCCAAGGTTTACGGCAGACTCTTGAGCAGCACGT
TCCCCGGTGGCTGCAAAGCTTGGGAGCCAACAACATGGGCAACTCCTGCGTCTGTCGAGAAGACAGTGGACCGGAAGACA
ACGCGGAATCCAGGAGTCGCCAGGCGGAGAGCAGCAGAGTCCCTGCGCCTGAAACAAGGAGCCATCCGAGGGACCCCGTA
CGGCCTCCCCGTCGGGGACGGGGCCCCCATGAACCCAGGAGGAAAAAACATAACGTGGATGGATTAGTTCTGGACACGCT
GGCGGTCATTCGGACACTTGTCGACAATGATCAGGAACCTCCTTATTCCATGATGACTTTGCATGAAATGGCTGAAACAG
ATGAAGGCTGGCTGGAAGTTGTCCAATCGCTAATTAGGGTTATTCCATTAGAAGATCCCCTGGGACCAGCTGTTATAACG
TTGCTACTGGATGAGTGCCCGTTGCCAACAAAAGATGCATTGCAGAAGTTGACGGAAATCTTAAATTTAAGCGGAGCCGT
TGCGCGCCAGGATGCGTGCCACCCTGCCAAACATCGGAACACCACCGCCGTCCTGGGCTGTTTGGCAGAGAAGCTTGCGG
GTCCTGCAAGTATAGGTTTGCTCAGTGAAGGAATCTTGGAATACTTGCTGCAGAGCTTGGAGTTCCAGTCCCACCCAACA
GTAATGCTTTTTGCACTAATAGCCCTGGAAAAGTTTGCACAAACAAGTGAAAATAAAGTGACTGTTTCCCAGACTTGTAT
CAGCGACCAACTTGTCCTGTTAGAGAAATGGATGGATAATCCGGACTACTTAAAGCGCCAAGTCGGTTTCTGCGCTCAGT
GGAGTTTAGATAACCTGTTTTTGAAAGAAGGCAGGCAGTTTACGTACGAGAAGGTTGACTTGACCCACATTAACGCCATG
CTGAATAGTAACGACGTCAGTGAATACCTTAAGATCTCACCGCACGGGTTGGAGGCCCGGTGCGACGCCTCCTCTTTCGA
AAGCGTCCGGTGCACCTTCTGCGTGGATTCTGGCGTCTGGTATTATGAAGTCACGGTCGTCACGTCCGGCGTGATGCAGA
TCGGGTGGGCTACCAAAGACAGCAAGTTCCTCAATCATGAAGGTTATGGCATCGGGGACGACGAGTACTCCTGCGCATAC
GACGGCTGCCGGCAGCTGATCTGGTATAATGCCAGAAGTAAACCGCACTCCCACCCGTGCTGGAAGGAAGGCTTGGCTGA
AGGTGACACAATAGGATTTTTGCTGGACCTGCAGGACAAGAAGATGGTTTTTTATTTAAACGGGAACCAGCTTCCAGCCG
AGAAGCAAGTCTTTTCTTCTGCTGTGTCTGGCTTCTTTGCTGCGGCGAGTTTCATGTCCTACCAACAGTGCGAGTTCAAC
TTTGGAGCGAAACCTTTCAAATACCCGCCATCCGCTAAATTTAGCACCTTTAACAATTATGCCTTCCTGACAGCAGAAGA
GAAGATCATTTTACCCAGACACAGACGCTTGGCCTTGTTGAAGCAAGTGAGCATCCGAGAAAACTGCTGCACCCTTTGCT
GTGATGAAATAGCCGACACTGAACTCAGGCCGTGTGGACATAGTGACTTGTGCATGGAGTGTGCCTTGCAGCTGGAGACC
TGCCCTTTGTGTCGGCAAGAGATCCAGACCCGGGTCCGACAGATCGCTCACATTTCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP009831_adrenal | 24 .71 RPM |
| SRP009831_brain | 9 .42 RPM |
| SRP009831_dewlap | 37 .42 RPM |
| SRP009831_embryo | 23 .62 RPM |
| SRP009831_heart | 13 .23 RPM |
| SRP009831_liver | 16 .77 RPM |
| SRP009831_lung | 22 .62 RPM |
| SRP009831_ovary | 49 .30 RPM |
| SRP009831_skeletal_muscle | 7 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012138 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_acar_84 | 80.46 | 52.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSACAG00000006680 retrocopies