Parental gene:

USP14, ENSACAG00000008213

Aliases:None
Description:Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:G1KHK9]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:4:39289788..39316560(+)


>ENSACAG00000008213
ATGCCGCTTTTCACAGTTAATGTAAAATGGGGTAAAGAGAAATTCGATGGAGTGGAGCTGAATACGGATGAGCCTCCAAT
GGTATTCAAAGCTCAGCTTTTTGCTTTGACTGGAGTTCAGCCTGACAGACAGAAAGTAATGGTGAAAGGTGGAACTGTAA
AGGATGATGACTGGGGAAACATCAAAATTAAAAATGGGATGACCTTATTAATGATGGGTTCCGCTGAAGCGCTTCCTGAA
GAACCAGTAGCCAGGCCTGTTTTTGTTGAAGATATGACAGAGGAACAGTTGGCTTCAGCTATGGAGTTACCGTGTGGCTT
AACAAATCTTGGGAATACTTGTTATATGAATGCTACAGTTCAGTGTATTCGTTCTGTGCCAGAACTGAAAGAAGCCCTTA
AGAGGTATGCTGGTGCCTTAAGAGCTTCAGGGGAAATGGCCTCTGCTCAGTATATTACTGCAGCTCTTAGAGATTTATTT
GATTCCATGGATAAAACCTCCTCTAGTATCCCTCCCATCATTCTCCTCCAGTTTTTACATATGGCCTTTCCTCAGTTTGC
GGAGAAAGGCGATCAAGGCCAGTATCTTCAACAGGATGCCAATGAATGTTGGGTACAGATGATGCGAGTACTGCAGCAGA
AGTTAGAAGGGATAGAAGGTGATACAGTTATGGAAACCGACCCTGGAGCTTCAGGAGCAGCTGCTGCACCTCCTAAAAAG
AAGAGCTTAATTGATCAATTTTTCAGTATTGAATTTGAAACTACCATGAAATGTACAGAAGCAGAAGAAGAGGAAGTCAC
AAAAGGAAGAGAGAATCAACTCCAACTTAGTTGCTTTATCAATCAAGAAGTTAAATATCTTTTCACGGGTCTTAAACTGC
GCCTTCAAGAAGAAATCACCAAACTGTCTCCAACCTTGCAAAGAAATGCGCTTTACATAAAATCTTCCAAAATAAGTCGC
CTGCCTGCTTACCTGACTATTCAGATGGTTCGTTTCTTTTACAAAGAGAAAGAATCTGTGAATGCCAAAGTTCTCAAGGA
TGTTAAATTTCCTCTTATGTTGGATGTATATGAATTATGTACACCAGAACTCCAAGAGAGCATGGTTCCCTACCGATCAA
AATTCAAGGACTTGGAAGACAAGAAAGTAAATCAACAAACAAAGAATTCTAGTAAAGGTGATGGTGCACAGAAAGAAGTT
AAATATGAGGCATTTTCCTTTCCTGATGATATTGGCTCCAATAACTGTGGCTATTACGAACTGCAGGCCGTGTTAACACA
TCAAGGAAGATCTAGTTCTTCTGGACACTATGTATCCTGGGTTAAAAGAAAAGAAGACGAATGGATTAAATTTGATGATG
ACAAAGTCAGCACTGTTACACCGGAAGACATCTTGAGGCTATCTGGGGGTGGAGACTGGCATATAGCTTACGTCCTTCTT
TATGGGCCACGCAGAATTGAAGTTATGGAAGAGGAAGCTGAACAATAG

Library Parental gene expression (RPM)
SRP009831_adrenal 49 .27 RPM
SRP009831_brain 44 .88 RPM
SRP009831_dewlap 134 .79 RPM
SRP009831_embryo 145 .35 RPM
SRP009831_heart 50 .33 RPM
SRP009831_liver 31 .29 RPM
SRP009831_lung 33 .90 RPM
SRP009831_ovary 143 .43 RPM
SRP009831_skeletal_muscle 69 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010588 ortholog_one2one 4 retrogenes
retro_chof_1736, retro_chof_2406, retro_chof_2529, retro_chof_2603,
Echinops telfairi ENSETEG00000004949 ortholog_one2one 1 retrogene
retro_etel_966,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_108 77.39 75.35
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Download FASTA sequences of all ENSACAG00000008213 retrocopies