Parental gene: | SSRP1, ENSBTAG00000000375 |
| Aliases: | None |
| Description: | FACT complex subunit SSRP1 [Source:RefSeq peptide;Acc:NP_001094511] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 15:81817412..81826972(-) |
>ENSBTAG00000000375
ATGGCAGAAACCCTGGAGTTCAACGACGTGTATCAGGAGGTGAAGGGCTCCATGAATGATGGTCGGCTGAGGCTGAGCCG
CCAGGGCATCATCTTTAAGAACAGTAAGACGGGCAAGGTGGACAACATTCAGGCCGGGGAGCTGACCGAAGGCATCTGGC
GCCGGGTGGCTCTGGGCCACGGGCTTAAACTGCTCACGAAGAACGGCCATGTCTATAAGTATGACGGCTTCCGGGAATCG
GAGTTTGAGAAACTCTCTGATTTCTTCAAAACTCACTATCGCCTGGAGCTAATGGAGAAGGACTTGTGTGTGAAGGGCTG
GAACTGGGGAACCGTGAAGTTTGGTGGGCAGCTGCTTTCCTTCGACATTGGCGACCAGCCGGTCTTCGAGATCCCTCTCA
GCAATGTGTCCCAGTGCACCACCGGCAAGAACGAGGTGACGCTGGAATTCCACCAGAACGATGATGCAGAGGTCTCCCTC
ATGGAGGTGCGCTTCTACGTGCCGCCCACCCAGGAGGACGGCGTGGACCCCGTCGAGGCCTTTGCCCAGAACGTGCTGTC
GAAGGCGGACGTGATCCAGGCCACCGGAGACGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACGCCCCGAGGCCGCT
ACGACATCCGCATCTACCCCACCTTCCTGCACCTGCACGGGAAGACCTTCGACTACAAGATCCCCTACACCACGGTGCTG
CGGCTCTTCCTGCTGCCCCACAAGGACCAGCGCCAGATGTTCTTCGTGATCAGCCTGGACCCCCCCATCAAGCAGGGTCA
GACTCGCTACCACTTCCTCATCCTGCTCTTCTCCAAGGACGAGGACATCTCCCTGACGCTCAACATGAACGAGGAGAAGG
TGGAGAAGCGCTTTGAGGGGCGGCTCACCAAGAACATGTCAGGATCCCTCTACGAGATGGTCAGCCGGGTCATGAAAGCG
CTGGTGAACCGCAAGATCACGGTCCCGGGCAATTTCCAAGGGCACTCGGGGGCCCAGTGCATCACCTGCTCCTACAAGGC
CAGCTCAGGGCTGCTGTACCCCCTGGAGCGGGGCTTCATCTACGTCCACAAGCCGCCCGTGCACATCCGCTTCGACGAGA
TCTCCTTTGTCAACTTCGCCCGCGGGACCACCACCACGCGTTCCTTTGACTTTGAAATTGAGACCAAGCAGGGCACCCAG
TATACCTTCAGCAGCATTGAGAGGGAGGAGTACGGCAAGCTGTTCGACTTTGTCAATGCTAAGAAGCTCAACATCAAAAA
CCGAGGGCTGAAAGAGGGCATGAACCCCAGCTACGACGAATACGCCGACTCGGACGAAGACCAGCACGACGCCTACCTGG
AACGGATGAAGGAGGAGGGCAAGATCCGCGAGGAGAACGCCAACGACAGCAGCGATGACTCGGGAGAGGAGACCGATGAG
TCCTTCAACCCGGGTGAAGAGGAGGAGGATGTGGCAGAGGAGTTTGACAGCAATGCCTCCGCCAGCTCCTCCAGTAACGA
GGGCGACAGCGACCGGGAAGAGAAGAAACGGAAGCAGCTTAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGA
AGCCCCTGGAGGTGAAGAAGGGCAAGGACCCCAATGCCCCCAAGAGGCCCATGTCTGCCTACATGCTGTGGCTGAATGCC
AGCCGGGAGAAGATCAAGTCAGACCATCCGGGCATCAGCGTCACGGACCTCTCCAAGAAGGCGGGTGAGATCTGGAAGGG
AATGTCCAAGGAGAAGAAGGAGGAGTGGGATCGCAAGGCTGAGGATGCCAGGAGGGAATATGAAAAAGCCATGAAGGAAT
ACGAAGGCGGCCGTGGAGAGTCTTCCAAGAGGGACAAGTCCAAGAAGAAGAAGAAAGTCAAAGTGAAGATGGAGAAAAAA
TCTACACCCTCCCGGGGCTCATCATCGAAGTCTTCATCAAGGCAGCTGAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTC
CAGTGACGAGAGCTCTTCCGGAGAAAACAAGGGCAAAAAGAAGAGAAGGCGGAGTGAGGACTCCGAAGAAGAGGAACTAG
CCAGTACTCCCCCTAGCTCAGAAGACTCGGCATCAGGATCTGATGAATAG
ATGGCAGAAACCCTGGAGTTCAACGACGTGTATCAGGAGGTGAAGGGCTCCATGAATGATGGTCGGCTGAGGCTGAGCCG
CCAGGGCATCATCTTTAAGAACAGTAAGACGGGCAAGGTGGACAACATTCAGGCCGGGGAGCTGACCGAAGGCATCTGGC
GCCGGGTGGCTCTGGGCCACGGGCTTAAACTGCTCACGAAGAACGGCCATGTCTATAAGTATGACGGCTTCCGGGAATCG
GAGTTTGAGAAACTCTCTGATTTCTTCAAAACTCACTATCGCCTGGAGCTAATGGAGAAGGACTTGTGTGTGAAGGGCTG
GAACTGGGGAACCGTGAAGTTTGGTGGGCAGCTGCTTTCCTTCGACATTGGCGACCAGCCGGTCTTCGAGATCCCTCTCA
GCAATGTGTCCCAGTGCACCACCGGCAAGAACGAGGTGACGCTGGAATTCCACCAGAACGATGATGCAGAGGTCTCCCTC
ATGGAGGTGCGCTTCTACGTGCCGCCCACCCAGGAGGACGGCGTGGACCCCGTCGAGGCCTTTGCCCAGAACGTGCTGTC
GAAGGCGGACGTGATCCAGGCCACCGGAGACGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACGCCCCGAGGCCGCT
ACGACATCCGCATCTACCCCACCTTCCTGCACCTGCACGGGAAGACCTTCGACTACAAGATCCCCTACACCACGGTGCTG
CGGCTCTTCCTGCTGCCCCACAAGGACCAGCGCCAGATGTTCTTCGTGATCAGCCTGGACCCCCCCATCAAGCAGGGTCA
GACTCGCTACCACTTCCTCATCCTGCTCTTCTCCAAGGACGAGGACATCTCCCTGACGCTCAACATGAACGAGGAGAAGG
TGGAGAAGCGCTTTGAGGGGCGGCTCACCAAGAACATGTCAGGATCCCTCTACGAGATGGTCAGCCGGGTCATGAAAGCG
CTGGTGAACCGCAAGATCACGGTCCCGGGCAATTTCCAAGGGCACTCGGGGGCCCAGTGCATCACCTGCTCCTACAAGGC
CAGCTCAGGGCTGCTGTACCCCCTGGAGCGGGGCTTCATCTACGTCCACAAGCCGCCCGTGCACATCCGCTTCGACGAGA
TCTCCTTTGTCAACTTCGCCCGCGGGACCACCACCACGCGTTCCTTTGACTTTGAAATTGAGACCAAGCAGGGCACCCAG
TATACCTTCAGCAGCATTGAGAGGGAGGAGTACGGCAAGCTGTTCGACTTTGTCAATGCTAAGAAGCTCAACATCAAAAA
CCGAGGGCTGAAAGAGGGCATGAACCCCAGCTACGACGAATACGCCGACTCGGACGAAGACCAGCACGACGCCTACCTGG
AACGGATGAAGGAGGAGGGCAAGATCCGCGAGGAGAACGCCAACGACAGCAGCGATGACTCGGGAGAGGAGACCGATGAG
TCCTTCAACCCGGGTGAAGAGGAGGAGGATGTGGCAGAGGAGTTTGACAGCAATGCCTCCGCCAGCTCCTCCAGTAACGA
GGGCGACAGCGACCGGGAAGAGAAGAAACGGAAGCAGCTTAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGA
AGCCCCTGGAGGTGAAGAAGGGCAAGGACCCCAATGCCCCCAAGAGGCCCATGTCTGCCTACATGCTGTGGCTGAATGCC
AGCCGGGAGAAGATCAAGTCAGACCATCCGGGCATCAGCGTCACGGACCTCTCCAAGAAGGCGGGTGAGATCTGGAAGGG
AATGTCCAAGGAGAAGAAGGAGGAGTGGGATCGCAAGGCTGAGGATGCCAGGAGGGAATATGAAAAAGCCATGAAGGAAT
ACGAAGGCGGCCGTGGAGAGTCTTCCAAGAGGGACAAGTCCAAGAAGAAGAAGAAAGTCAAAGTGAAGATGGAGAAAAAA
TCTACACCCTCCCGGGGCTCATCATCGAAGTCTTCATCAAGGCAGCTGAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTC
CAGTGACGAGAGCTCTTCCGGAGAAAACAAGGGCAAAAAGAAGAGAAGGCGGAGTGAGGACTCCGAAGAAGAGGAACTAG
CCAGTACTCCCCCTAGCTCAGAAGACTCGGCATCAGGATCTGATGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 108 .81 RPM |
| SRP017611_kidney | 74 .86 RPM |
| SRP017611_liver | 50 .59 RPM |
| ERP005899_muscle | 127 .22 RPM |
| ERP005899_liver | 24 .08 RPM |
| SRP030211_testis | 103 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000000480 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000016612 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1834 | 87.30 | 96.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000000375 retrocopies