Parental gene: | SSRP1, ENSCPOG00000000480 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_86:3094234..3102333(+) |
>ENSCPOG00000000480
ATGGCAGAAACGCTGGAATTCAACGACATCTACCAGGAGGTGAAAGGCTCCATGAACGATGGCCGCTTAAGGTTGAGCCG
CCAGGGCATCATATTCAAGAACAGCAAGACGGGCAAAGTGGACAATGTCCAGGCTGGGGAGCTGACTGAGGGCGTCTGGC
GACGGGTAGCTCTGGGCCACGGACTGAAACTGCTCACCAAGAACGGCCATGTCTACAAGTATGACGGCTTCCGAGAATCG
GAGTTTGAGAAACTTTCTGATTTCTTCAAAACCCATTACCGCCTGGAGCTCATGGAGAAGGACCTCTGTGTGAAAGGCTG
GAACTGGGGGACAGTGAAGTTTGGGGGGCAGCTGCTCTCCTTTGACATCGGGGACCAGCCTGTCTTCGAGATACCCCTCA
GCAACGTGTCCCAGTGCACCACGGGCAAGAATGAGGTGACGCTGGAGTTCCACCAGAATGATGATGCAGAGGTGTCCCTC
ATGGAGGTGCGCTTCTATGTCCCTCCCACCCAGGAGGATGGCGTGGACCCCGTCGAAGCCTTTGCCCAGAACGTGCTGTC
GAAGGCAGACGTCATCCAGGCCACTGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGCCTGACCCCACGTGGTCGCT
ACGACATCCGCATCTATCCCACCTTTCTGCACCTGCACGGCAAGACCTTCGACTACAAGATCCCCTACACCACGGTGCTG
CGCCTCTTCCTGCTGCCCCACAAGGATCAGCGCCAGATGTTCTTCGTGATCAGCCTGGACCCCCCGATAAAGCAGGGCCA
GACCCGCTACCACTTCCTCATCCTGCTCTTCTCCAAGGATGAGGACATCTCCTTGACCCTCAACATGAGCGAGGAGGAGG
TGGAGAAGCGCTTTGAGGGGCGGCTCACCAAGAACATGTCTGGGTCTCTCTACGAGATGGTCAGCCGGGTTATGAAGGCG
CTCGTGAACCGAAAGATCACGGTCCCCGGCAACTTCCAAGGGCACTCGGGGGCCCAGTGCATCACCTGCTCCTACAAGGC
CAGCTCAGGGCTGCTGTACCCGCTGGAGCGGGGCTTCATCTACGTGCACAAGCCACCTGTGCACATCCGCTTCGACGAGA
TCTCCTTCGTCAATTTTGCCCGCGGCACCACCACCACCCGCTCCTTTGACTTCGAGATCGAGACCAAGCAAGGCACGCAG
TATACCTTCAGCAGCATCGAGAGGGAGGAGTACGGAAAGCTCTTCGATTTTGTCAATGCGAAAAAGCTCAACATCAAGAA
CCGAGGACTGAAAGAGGGCATGAACCCAAGCTATGACGAGTATGCGGATTCTGACGAGGACCAGCACGATGCCTACCTGG
AGCGCATGAAGGAGGAGGGCAAGATCCGGGAGGAGAATGCCAACGACAGCAGCGACGACTCGGGCGAGGAGACGGACGAG
TCCTTCAACCCTGGGGAGGAGGAGGAGGACGTGGCTGAAGAGTTTGACAGCAACGCCTCAGCCAGCTCGTCTAGTAATGA
GGGTGACAGCGACCGGGAGGAGAAGAAGCGGAAACAGCTCAAAAGGGCCAAGATGACCAAGGATCGCAAGAGCCGAAAGA
AGACTGTGGAGGCGAAGAAGGGCAAAGACCCTAATGCCCCCAAGAGGCCGATGTCTGCGTACATGCTGTGGCTCAACGCC
AGTCGGGAAAAGATCAAGTCAGACCACCCCGGCATCAGCATCACGGACCTCTCCAAGAAGGCCGGCGAGATCTGGAAAGG
GATGTCCAAGGAGAAGAAGGAGGAGTGGGACCGCAAGGCTGAGGACGCCAGGAGGGAGTACGAGAAAGCCATGAAAGAGT
ATGAGGGAGGCCGTGGTGAGTCTTCCAAGAGGGACAAGTCGAAGAAAAAGAAGAAAGTGAAAGCAAAGATGGATAAGAAA
TCTACACCCTCTCGGGGTTCTTCGTCCAAATCATCATCCAGACAGCTAAGTGAGAGCTTCAAGAGCAAGGAATTTGTGTC
CAGTGACGAGAGCTCTTCAGGCGAGAACAAAACCAAGAAGAAGAGGCGGCGCAGTGAGGACTCTGAAGATGAGGAACTGG
CCAGCACCCCTCCCAGCTCAGAGGACTCGGCATCAGGATCTGACGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 51 .53 RPM |
| SRP017611_kidney | 59 .36 RPM |
| SRP017611_liver | 30 .99 RPM |
| SRP040447_lung | 91 .12 RPM |
| SRP040447_skeletal_muscle | 44 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000000375 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000016612 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_70 | 77.41 | 94.50 | Please wait, loading  |
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Download FASTA sequences of all ENSCPOG00000000480 retrocopies