Parental gene:

RNF167, ENSBTAG00000004913

Aliases:None
Description:E3 ubiquitin-protein ligase RNF167 [Source:RefSeq peptide;Acc:NP_001069873]
Organism:Cow (Bos taurus)
Coordinates:19:27085161..27087524(-)


>ENSBTAG00000004913
CAGGGCTTCCTTGTGGAGGCTCACCCAGACAATGCCTGCAGCCCCATTGCCCCACCACCCCCAGCCCCGGTCAACGGGTC
AGTCTTTATTGCACTGCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGTCCTAAATGCTCAGAAGGCTGGGTATGGTG
CAGCTGTGGTACACAATGTGAATTCCAATGAACTTCTGAACATGGTGTGGAATAGTGAGGAAATCCAGCAGCAGATCTGG
ATCCCGTCTGTGTTTATTGGGGAGAGGAGCTCCGAGTACCTGCGTGCCCTCTTTGTCTACGAGAAGGGGGCTCGGGTGCT
TCTCGTCCCAGACAATAGCTTCCCCTTGGGCTATTACCTCATCCCTTTCACAGGGATTGTAGGACTGCTGGTTTTGGCCA
TGGGAGCAGTGATGATAGTTCGTTGCATCCAGCATAGGAAACGGCTCCAGCGGAATCGACTGACCAAAGAGCAGCTGAAA
CAGATCCCTACACATGACTATCAGAAGGGAGACCAGTATGATGTGTGTGCCATCTGCCTGGATGAATATGAGGATGGGGA
CAAGCTGAGGGTACTCCCCTGTGCTCACGCTTATCACAGCCGCTGTGTGGACCCCTGGCTCACTCAAACCCGGAAGACCT
GCCCCATCTGCAAGCAGCCTGTGCATCGGGGTCCTGGGGATGATGAGCAGGAGGAAGAAAGCCAGGGGCAAGAGGGTGAT
GAGGAAGGGGAGCCAAGGGACCAGCCTGCCTCAGAACGGACCCCTCTTCTGGGCTCCAGCCCCACACCTCCCTCCTCCTT
TGGCTCTATAGCTCCAGCGCCCCTTGTCTTTCCTGGGTCTTCAACAGACCCCTCACCCTCTACCTCTTCTGCTGCTATCC
TGGTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 19 .60 RPM
SRP017611_kidney 39 .59 RPM
SRP017611_liver 36 .32 RPM
ERP005899_muscle 45 .87 RPM
ERP005899_liver 26 .39 RPM
SRP030211_testis 18 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006392 ortholog_one2one 1 retrogene
retro_amel_43,
Bos taurus ENSBTAG00000022920 other_paralog 1 retrogene
retro_btau_1358,
Canis familiaris ENSCAFG00000015830 possible_ortholog 2 retrogenes
retro_cfam_1053, retro_cfam_84,
Dipodomys ordii ENSDORG00000011757 ortholog_one2one 2 retrogenes
retro_dord_277, retro_dord_432,
Equus caballus ENSECAG00000021567 ortholog_one2one 1 retrogene
retro_ecab_583,
Felis catus ENSFCAG00000011173 ortholog_one2one 1 retrogene
retro_fcat_99,
Mustela putorius furo ENSMPUG00000010940 ortholog_one2one 1 retrogene
retro_mputfur_95,
Pteropus vampyrus ENSPVAG00000003781 ortholog_one2one 1 retrogene
retro_pvam_1206,
Sorex araneus ENSSARG00000011216 ortholog_one2one 1 retrogene
retro_sara_517,
Sus scrofa ENSSSCG00000017906 ortholog_one2one 1 retrogene
retro_sscr_518,
Tursiops truncatus ENSTTRG00000001298 ortholog_one2one 1 retrogene
retro_ttru_1062,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_217 73.97 98.98
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000004913 retrocopies