Parental gene: | STX17, ENSBTAG00000008016 |
| Aliases: | None |
| Description: | Syntaxin-17 [Source:UniProtKB/Swiss-Prot;Acc:Q5E9Y2] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 8:65425935..65483851(+) |
>ENSBTAG00000008016
ATGTCTGAAGATGAAGAAAAAGTGAAATTACGGCGTCTTGAACCAGCTATCCAGAAATTTACTAAGATAGTAATTCCAAC
AGATCTGGAGAGGTTAAGAAAGCACCAGATAAATATTGAGAAGTATCAGAGGTGCAGAGTATGGGACAAGTTGCATGAAG
AACATATCAATGCAGGACGTACAGTTCAGCAACTCCGCTCCAATATCCGAGAAATGGAGAAGCTTTGCTTGAAAGTGCGA
AAGGATGACCTAGGACTTCTGAAGAGAATGATAGATCCTGTTAAAGAAGAAGCATCAGCGGCAACAGCAGAATTTCTCCA
ACTCCATCTGGAATCTGTAGAAGAACTTAAGAAACAATTTAATGATGAAGAAACTTTTTTACAGCCTTCTTTGACCAGAT
CCATGACTGTTGGCGGAACATTTCACAGTACTGAAGATGAAGCTGATCCTCAGAGTATGACTCAGATTTATGCATTGCCT
GAAATTCCTCGAGATCAAAATGCTGCAGAATCATGGGAGACCTTAGAAGCGGACTTAATTGAACTTAGCCAACTGGTCAC
TGATTTCTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGACAGCATTGAAGACCATGTCAACACTGCTGCTGTGAATG
TTGAAGAGGGAACCAAAAACTTGGGGAAGGCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGA
GGAGTGGTGGGGGGTCCGATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTT
GGGCTTCACAGGTGGAAAATTGATACAAAGAAGGAAACAGAAAATGATGGAGAAGCTCGCTTCCAGCTGTCCAGATCTCC
CCAGCCAAACTGACAAAAAATGTAGTTAA
ATGTCTGAAGATGAAGAAAAAGTGAAATTACGGCGTCTTGAACCAGCTATCCAGAAATTTACTAAGATAGTAATTCCAAC
AGATCTGGAGAGGTTAAGAAAGCACCAGATAAATATTGAGAAGTATCAGAGGTGCAGAGTATGGGACAAGTTGCATGAAG
AACATATCAATGCAGGACGTACAGTTCAGCAACTCCGCTCCAATATCCGAGAAATGGAGAAGCTTTGCTTGAAAGTGCGA
AAGGATGACCTAGGACTTCTGAAGAGAATGATAGATCCTGTTAAAGAAGAAGCATCAGCGGCAACAGCAGAATTTCTCCA
ACTCCATCTGGAATCTGTAGAAGAACTTAAGAAACAATTTAATGATGAAGAAACTTTTTTACAGCCTTCTTTGACCAGAT
CCATGACTGTTGGCGGAACATTTCACAGTACTGAAGATGAAGCTGATCCTCAGAGTATGACTCAGATTTATGCATTGCCT
GAAATTCCTCGAGATCAAAATGCTGCAGAATCATGGGAGACCTTAGAAGCGGACTTAATTGAACTTAGCCAACTGGTCAC
TGATTTCTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGACAGCATTGAAGACCATGTCAACACTGCTGCTGTGAATG
TTGAAGAGGGAACCAAAAACTTGGGGAAGGCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGA
GGAGTGGTGGGGGGTCCGATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTT
GGGCTTCACAGGTGGAAAATTGATACAAAGAAGGAAACAGAAAATGATGGAGAAGCTCGCTTCCAGCTGTCCAGATCTCC
CCAGCCAAACTGACAAAAAATGTAGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 6 .03 RPM |
| SRP017611_kidney | 9 .60 RPM |
| SRP017611_liver | 4 .91 RPM |
| ERP005899_muscle | 13 .46 RPM |
| ERP005899_liver | 6 .78 RPM |
| SRP030211_testis | 5 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013030 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011745 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016920 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1534 | 73.84 | 91.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000008016 retrocopies