Parental gene: | POMGNT1, ENSBTAG00000013322 |
| Aliases: | None |
| Description: | protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 [Source:RefSeq peptide;Acc:NP_001019656] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 3:100472062..100495789(+) |
>ENSBTAG00000013322
ATGGACGACTGGAAGCCCAGCCCCCTCATCAAGCCCTTTGGGGCGCGAAAAAAGCGGAGCTGGTATCTTACCTGGAAGTA
TAAACTGACCAACCAGCGGGCCCTGCGGAGGTTCTGTCAGACAGGAGCCGTGCTTTTCCTACTGGTGACCGTCATTGTCA
ACATCAAGTTGATCCTGGACACACGACGAGCTATCAGCGAGGCCAGTGAAGACCTGGAGCCAGAACAAGACTATGATGAG
GCCCTGGGCCGATTGGAGCCTCCACGGCGCAGAGGCAGTGGTCCCCGACGTGTCCTGGATGTGGAGGTATACTCAAGCCG
CAGCAAAGTGTATGTGGCAGTGGACGGCACCACGGTGCTGGAGGATGAGGCCCAGGAGCAGGGCCGGGGCATCCACGTCA
TCGTCCTCAACCAGGCCACGGGCCATGTGATGGCAAAGCGAGTGTTTGACACCTATTCACCTCATGAGGATGAGGCCATG
GTGCTGTTCCTCAACATGGTGGCACCTGGCCGAGTGCTCATCTGCACCGTCAAGGACGAGGGCTCCTTCCACCTCAAGGA
CACCGCCAAGGCTCTGCTGAGGAGCCTAGGCAGCCAGGCTGGCCCTGCCCTGGGCTGGAGAGACACCTGGGCCTTCGTGG
GACGAAAAGGAGGTCCTGTGCTCGGGGAGAAACATTCTAAGTCACCTGCCCTCTCCTCCTGGGGGGATCCAGTTCTGCTG
AAGACAGATGTGCCGCTGAGCTCAGCTGAAGAGGCAGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCCGCCG
CTTCTGCAGCAAAGTTGAGGGCTATGGGAGCGTGTGCAGCTGCAAGGACCCCACACCCATCGAGTTCAGCCCTGACCCAC
TCCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTGTCATTGCAGGGAACCGGCCCAATTACCTGTACAGGATGCTGCGC
TCTCTACTCTCAGCCCAGGGGGTGTCTCCCCAGATGATAACAGTTTTCATCGATGGCTACTATGAGGAGCCGATGGATGT
GGTGGCGCTGTTTGGTCTGAGGGGCATCCAGCACACTCCCATCAGCATCAAGAACGCCCGTGTGTCTCAGCACTACAAGG
CCAGCCTCACTGCCACTTTCAACCTGTTTCCGGAAGCCAAGTTTGCTGTGGTTCTGGAAGAGGACCTGGACATTGCTGTG
GATTTTTTCAGTTTCCTGAGCCAATCCATCCACCTGCTGGAGGAGGACGACAGCTTGTACTGTATCTCTGCCTGGAATGA
CCAGGGCTATGAGCACACGGCAGAGGACCCAGCACTGCTATACCGTGTGGAGACCATGCCTGGGCTGGGCTGGGTGCTCA
GGAAGTCCTTGTACAAGGAGGAGCTTGAACCCAAGTGGCCCACACCAGAAAAGCTCTGGGACTGGGACATGTGGATGCGG
ATGCCGGAACAACGCCGAGGCCGAGAATGCATTATCCCTGACGTGTCCCGATCCTACCACTTCGGCATCGTTGGCCTCAA
CATGAATGGCTACTTCCATGAGGCCTACTTCAAGAAGCACAAGTTCAACACGGTTCCAGGTGTCCAGCTCAGGAACGTGG
ACAGTCTGAAGAAGGATGCTTATGAAGTGGAAGTTCACAGGCTGCTCAGCGAAGCAGAGGTTCTGGACCACAGCAAGAAC
CCTTGTGAAGACTCTTTCCTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATCCGGATGGAGAAGGACGATGACTT
CACCACCTGGACTCAGCTTGCCAAGTGCCTCCGAATCTGGGACCTGGATGTGCGTGGCAACCACCGGGGCCTGTGGAGAC
TGTTTCGGAAGAAGAACCACTTCCTGGTGGTGGGGGTCCCAGCCTCCCCGTACTCGATGAAGAAGCCACCATCAATCACC
CCAATTTTCTTGGAGTCACCCCCAAAGGAGGAGGGAGGCCCAGGAGCTGCAGAACAGACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 11 .61 RPM |
| ERP005899_muscle | 45 .35 RPM |
| SRP017611_brain | 38 .32 RPM |
| SRP017611_kidney | 64 .43 RPM |
| SRP017611_liver | 21 .44 RPM |
| SRP030211_testis | 109 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000003522 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_447 | 77.07 | 76.82 | Please wait, loading  |
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Download FASTA sequences of all ENSBTAG00000013322 retrocopies