Parental gene: | DFFA, ENSBTAG00000013535 |
| Aliases: | None |
| Description: | DNA fragmentation factor subunit alpha [Source:RefSeq peptide;Acc:NP_001068810] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 16:43994267..44004665(+) |
>ENSBTAG00000013535
ATGGAGGTCCCCGGCGGCCCTGCAGCTCCGGAACCCGGCGAGATCCGGGCTCTAAAGCAGTGTTTGCTGCGCCGCAACAA
AAGCCGGGAACAGCACGGCGTGGCGGCCTCTTGCCTCAAGGAGCTGAGGAACAAAGCTTGTGACATTCTGGCCATTGATA
AGTCCCTGGCACCAGTAACCCTGGTCCTGGCAGAGGATGGCACCATAGTGGATGATGATGATTACTTCCTATGTCTTCCT
GCCAATACTAAGTTTGTGGTATTGGCTGGGAATGAGAAGTGGACACACAATTCAGATGGAGGTACTGCTTGGATTACCCA
AGAGTCCTTCGACAGAGATGAAACAGACAGCGGGGCAGGGCTGAAGTGGAAAAACGTGGCCAGGCAGCTGAAGGAAGACC
TATCCAGCATCATACTGCTGTCCGAGGAGGAGCTCCAGATGCTCATTGATGTCCCGTGTTCGGAGCTGGCTCAGGAACTC
AGCCAAAGTCATGTGGCAGTCCAGGGGCTCCAGAACACCCTCCAGCAGGTGCTTGACCAGAGAGAGGAAGCCCGTCAGTC
CAGGCAGCTCCTGGAACTTTACCTTCGGGCTTTGGAGAAGGAAGGTGGCATCTTGTCGAAGCAGCAAGAGTCCAGAGCTG
ACCTTGGGGACGAGAGCGATGCTGTTGACACAGGCATTAGAGAGAGCTTCTCCGAAGTTACGCCTGCAAGCCAGATCCTC
TTGGCGCTGAAGGAGAAACCTGCCCCAGAGCTGAGTTTGTCTAGTCAGGATCTGGAGTTGGTTGCCAAGGAGGACCCTAA
AGCACTGGCTGTTGCTTTGAACTGGGACCTAAAGAAGACGGAAGCCGTTCAACAGGCCTGTAATCAGGAACTTAGGCTAC
GCCTCCAGCAGGTGCAGAGCTTGCGTTCTCTGAGGAGCATTTCAGCAAGGACGAGTTCACTGCCTGGAGACATGGAGAAC
CCCAAACGAACCAGACGAGACCCCATGTAG
ATGGAGGTCCCCGGCGGCCCTGCAGCTCCGGAACCCGGCGAGATCCGGGCTCTAAAGCAGTGTTTGCTGCGCCGCAACAA
AAGCCGGGAACAGCACGGCGTGGCGGCCTCTTGCCTCAAGGAGCTGAGGAACAAAGCTTGTGACATTCTGGCCATTGATA
AGTCCCTGGCACCAGTAACCCTGGTCCTGGCAGAGGATGGCACCATAGTGGATGATGATGATTACTTCCTATGTCTTCCT
GCCAATACTAAGTTTGTGGTATTGGCTGGGAATGAGAAGTGGACACACAATTCAGATGGAGGTACTGCTTGGATTACCCA
AGAGTCCTTCGACAGAGATGAAACAGACAGCGGGGCAGGGCTGAAGTGGAAAAACGTGGCCAGGCAGCTGAAGGAAGACC
TATCCAGCATCATACTGCTGTCCGAGGAGGAGCTCCAGATGCTCATTGATGTCCCGTGTTCGGAGCTGGCTCAGGAACTC
AGCCAAAGTCATGTGGCAGTCCAGGGGCTCCAGAACACCCTCCAGCAGGTGCTTGACCAGAGAGAGGAAGCCCGTCAGTC
CAGGCAGCTCCTGGAACTTTACCTTCGGGCTTTGGAGAAGGAAGGTGGCATCTTGTCGAAGCAGCAAGAGTCCAGAGCTG
ACCTTGGGGACGAGAGCGATGCTGTTGACACAGGCATTAGAGAGAGCTTCTCCGAAGTTACGCCTGCAAGCCAGATCCTC
TTGGCGCTGAAGGAGAAACCTGCCCCAGAGCTGAGTTTGTCTAGTCAGGATCTGGAGTTGGTTGCCAAGGAGGACCCTAA
AGCACTGGCTGTTGCTTTGAACTGGGACCTAAAGAAGACGGAAGCCGTTCAACAGGCCTGTAATCAGGAACTTAGGCTAC
GCCTCCAGCAGGTGCAGAGCTTGCGTTCTCTGAGGAGCATTTCAGCAAGGACGAGTTCACTGCCTGGAGACATGGAGAAC
CCCAAACGAACCAGACGAGACCCCATGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 14 .57 RPM |
| SRP017611_kidney | 20 .69 RPM |
| SRP017611_liver | 9 .51 RPM |
| ERP005899_muscle | 16 .58 RPM |
| ERP005899_liver | 10 .81 RPM |
| SRP030211_testis | 4 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000160049 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012721 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001899 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_211 | 82.33 | 80.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000013535 retrocopies