Parental gene: | DFFA, ENSPPYG00000001899 |
| Aliases: | None |
| Description: | DNA fragmentation factor subunit alpha [Source:RefSeq peptide;Acc:NP_001126304] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:219904717..219917791(+) |
>ENSPPYG00000001899
ATGGAGGTGACCGGGGAAGCCGGGGTACCAGAATCTGGCGAGATCCGGACTCTAAAGCCGTGTCTGCTGCGCCGCAACTA
CAGCCGCGAACAGCACGGCGTGGCCGCCTCCTGCCTCGAAGACCTGAGGAGCAAGGCCTGTGACATTCTGGCCATTGATA
AGTCCCTGACACCAGTCACCCTGGTCCTGGCAGAGGATGGCACCATAGTGGATGATGACGATTACTTTCTGTGTCTACCT
TCCAATACTAAGTTTGTGGCGTTGGCCAATAATGAGAAATGGGCATACAACAATTCAGATGGAGGTACAGCTTGGATTTC
CCAAGAGTCCTTTGATGTAGATGAAACAGACAGCGGGGCAGGGTTGAAGTGGAAGAACGTGGCCAGGCAGCTGAAAGAAG
ATCTGTCCAGCATCATCCTCCTATCAGAGGAGGACCTCCAGATGCTTGTTGACGCTCCCTGCTCAGACCTGGCTCAGGAA
CTACATCAGAGTTGTGCCACCGTCCAGCGGCTACAGCACACGCTCCAGCAGGTGCTTGACCAAAGAGAGGAAGTGCGTCA
GTCCAAGCAGCTCCTGCAGCTGTACCTCCAGGCTTTGGAGAAAGAGGGCAGCCTCTTGTCAAAGCAGGAAGAGTCCAAAG
CTGCCTTTGGTGAGGAGGCGGATGCAGTAGACACGGGTATCAGCAGAGAGACCTCCTCGGACGTTGCACTGGCGAGCCAC
ATCCTTACTGCACTGAGGGAGAAGCCAGCTCCAGAGCTGAGCTTATCTAGTCAGAATTTGGAGTTGGTTACCAAGGAAGA
CCCCAAAGCGCTGGCTGTTGCCTTGAACTGGGACATAAAGAAGACGGAGACTGTTCAAGAGGCCTGTGAGCGGGAGCTCG
CCCTGCGCCTGCAGCAGATGCAGAGCTTGCATTCTCTCCGGAGCATCTCATCAAGCAAGGCCTCACGACCTGGTGACCTG
CAGAATCCTAAGCGAGCCAGACAGGATCCCACATAG
ATGGAGGTGACCGGGGAAGCCGGGGTACCAGAATCTGGCGAGATCCGGACTCTAAAGCCGTGTCTGCTGCGCCGCAACTA
CAGCCGCGAACAGCACGGCGTGGCCGCCTCCTGCCTCGAAGACCTGAGGAGCAAGGCCTGTGACATTCTGGCCATTGATA
AGTCCCTGACACCAGTCACCCTGGTCCTGGCAGAGGATGGCACCATAGTGGATGATGACGATTACTTTCTGTGTCTACCT
TCCAATACTAAGTTTGTGGCGTTGGCCAATAATGAGAAATGGGCATACAACAATTCAGATGGAGGTACAGCTTGGATTTC
CCAAGAGTCCTTTGATGTAGATGAAACAGACAGCGGGGCAGGGTTGAAGTGGAAGAACGTGGCCAGGCAGCTGAAAGAAG
ATCTGTCCAGCATCATCCTCCTATCAGAGGAGGACCTCCAGATGCTTGTTGACGCTCCCTGCTCAGACCTGGCTCAGGAA
CTACATCAGAGTTGTGCCACCGTCCAGCGGCTACAGCACACGCTCCAGCAGGTGCTTGACCAAAGAGAGGAAGTGCGTCA
GTCCAAGCAGCTCCTGCAGCTGTACCTCCAGGCTTTGGAGAAAGAGGGCAGCCTCTTGTCAAAGCAGGAAGAGTCCAAAG
CTGCCTTTGGTGAGGAGGCGGATGCAGTAGACACGGGTATCAGCAGAGAGACCTCCTCGGACGTTGCACTGGCGAGCCAC
ATCCTTACTGCACTGAGGGAGAAGCCAGCTCCAGAGCTGAGCTTATCTAGTCAGAATTTGGAGTTGGTTACCAAGGAAGA
CCCCAAAGCGCTGGCTGTTGCCTTGAACTGGGACATAAAGAAGACGGAGACTGTTCAAGAGGCCTGTGAGCGGGAGCTCG
CCCTGCGCCTGCAGCAGATGCAGAGCTTGCATTCTCTCCGGAGCATCTCATCAAGCAAGGCCTCACGACCTGGTGACCTG
CAGAATCCTAAGCGAGCCAGACAGGATCCCACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 12 .22 RPM |
| SRP007412_cerebellum | 7 .30 RPM |
| SRP007412_heart | 8 .58 RPM |
| SRP007412_kidney | 18 .26 RPM |
| SRP007412_liver | 8 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013535 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000160049 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012721 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3242 | 66.52 | 67.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001899 retrocopies