Parental gene: | BT.79166, ENSBTAG00000016174 |
| Aliases: | None |
| Description: | nucleolin [Source:RefSeq peptide;Acc:NP_001193589] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 2:120039584..120049214(-) |
>ENSBTAG00000016174
ATGGTAAAGCTCGCAAAGGCCGGTAAAAATCAAGGTGACTCCAAGAAAATGGCTCCTCCCCCAAAGGAGGTAGAAGAAGA
TAGTGAAGATGAGGAAATGTCAGAAGATGAAGACGATGAGAGCAGTGGAGAAGAGGTTGTTATCCCTCAGAAAAAAGGCA
AGAAGGCTGCCACAACTCCAGCAAAGAAGATGGTGGTTTCCCCAACAAAAAAGGTTGCAGTTGCCACACCAGCAAAGAAA
GCAGTTGTCACCCCTGGCAAAAAGGCAGCAGCTATGCCAGCCAAGAAGACAGTTACACCTGCCAAAGCAGTGGTTACACC
TGGCAAAAAGGGAGCCACCCCAGGCAAAGCAGTGGTAGCAACCTCTGGTAAGAAGGGAGCAGCCACCCCAGGCAAGGGAG
CAAAGAACGGCAAGAATGCCAAGAAGGAAGACAGTGATGAAGAAGATGAAGATGACAGTGAAGAGGAAGACGATGATGAT
GAAGAGGAGGATGAGCCAGCAGTGAGGAAGGCAGCTGCTGCTTTTGGTGCTGCTCCTGCCACAGATGATGAGGATGACGA
GGATGACGATGATGACGACGATGAGGAGGAGGAGGAGGATGAGGAGGATGAGGAGGACGAAGATGACTCTGAAGAAGAAC
CTATGGAGATTGTACCAGCCAAAGGAAAGAAAGCTCCAGTAAAAGCTGTTCCTGTGAAGGCTAAGAGCACTGCTGAAGAT
GAAGATGAAGAGGATGATGATGATGATGATGATGAAGAGGAGGAGGAAGAGGATGACGATGATGAAGACGACGACGATGA
GGAGGAAGAGGAGGAGGAGGAAGAGGAGGAAGAGGAAGAAGAGCCTGTCAAAGAAGCACCTGGAAAACGAAAGAAGGAAA
TGGCCAAACAAAAAGCAGCTCCTGAAGCCAAGAAACAAAAAGTGGAAGGCACAGAACCAACTACATCTTTCAATCTCTTT
GTTGGAAATCTGAACTTCAATAAATCTGCTCCTGAATTGAAAACGGGTATCAGTGATCTTTTTGCTAAAAATGATCTTGC
TGTTGTTGATGTCAGAATTGGTGTGTCTAGGAAGTTTGGCTATGTGGATTTTGAATCTGCCGAAGACCTGGAAAAAGCCT
TGGAACTCACTGGTTTAAAAGTCTTTGGCAATGAAATTAAACTAGAAAAACCAAAGGGAAAAGACAGTAAGAAAGATCGA
GATGCAAGAACACTTCTGGCTAAAAATCTGCCTTACAAAGTTACTCAGGATGAATTAAAAGAAGTGTTTGAAGATGCTGT
GGAGATCAGATTAGTCAGCAAGGATGGAAAGAGTAAAGGGATTGCTTATATTGAATTTAAGACAGAAGCTGATGCAGAAA
AAACCTTGGAAGAAAAGCAGGGAACAGAGATAGATGGGCGATCCATTTCTCTGTACTACACCGGAGAGAAAGGTCAAAGT
CAAGACCATAGAGGTGGAAAGAACAGCACTTGGAGTGGTGAATCAAAAACCCTGGTTTTAAGCAATCTCTCCTATAGTGC
AACGGAAGAAACTCTTCAGGAAGTATTTGAGAAGGCAACTCATATCAAGGTGCCCCAGAACCAAAATGGCAAATCTAAAG
GGTATGCATTTATAGAATTTGCTTCATTTGAAGATGCTAAAGAAGCTTTAAATTCATGTAATAAAAGGGAAATTGAGGGC
AGAGCCATCAGACTGGAGTTGCAAGGACCCAGGGGATCACCTAATGCAAGAAGCCAGCCATCCAAAACTCTCTTTGTCAA
AGGTCTCTCTGAGGATACCACAGAAGAGACGTTAAAAGAGTCGTTTGATGGCTCTATTCGAGCAAGGATAGTCACTGACC
GGGAGACTGGATCCTCCAAAGGGTTTGGTTTTGTAGACTTCAACAGCGAGGAAGATGCCAAAGCTGCCAAGGAGGCCATG
GAAGATGGTGAAATCGATGGAAACAAAGTCACTTTGGACTGGGCCAAACCTAAGGGTGAAGGTGGCTTTGGTGGCCGAGG
AGGAGGCAGAGGTGGCTTTGGAGGCCGAGGTGGTGGCAGAGGTGGCCGAGGTGGCTTTGGTGGCAGAGGCCGGGGAGGCT
TTGGAGGGCGAGGAGGCTTCCGAGGAGGCAGAGGAGGAGGAGGAGACCACAAGCCACAAGGAAAGAAGACGAAGTTTGAA
TAG
ATGGTAAAGCTCGCAAAGGCCGGTAAAAATCAAGGTGACTCCAAGAAAATGGCTCCTCCCCCAAAGGAGGTAGAAGAAGA
TAGTGAAGATGAGGAAATGTCAGAAGATGAAGACGATGAGAGCAGTGGAGAAGAGGTTGTTATCCCTCAGAAAAAAGGCA
AGAAGGCTGCCACAACTCCAGCAAAGAAGATGGTGGTTTCCCCAACAAAAAAGGTTGCAGTTGCCACACCAGCAAAGAAA
GCAGTTGTCACCCCTGGCAAAAAGGCAGCAGCTATGCCAGCCAAGAAGACAGTTACACCTGCCAAAGCAGTGGTTACACC
TGGCAAAAAGGGAGCCACCCCAGGCAAAGCAGTGGTAGCAACCTCTGGTAAGAAGGGAGCAGCCACCCCAGGCAAGGGAG
CAAAGAACGGCAAGAATGCCAAGAAGGAAGACAGTGATGAAGAAGATGAAGATGACAGTGAAGAGGAAGACGATGATGAT
GAAGAGGAGGATGAGCCAGCAGTGAGGAAGGCAGCTGCTGCTTTTGGTGCTGCTCCTGCCACAGATGATGAGGATGACGA
GGATGACGATGATGACGACGATGAGGAGGAGGAGGAGGATGAGGAGGATGAGGAGGACGAAGATGACTCTGAAGAAGAAC
CTATGGAGATTGTACCAGCCAAAGGAAAGAAAGCTCCAGTAAAAGCTGTTCCTGTGAAGGCTAAGAGCACTGCTGAAGAT
GAAGATGAAGAGGATGATGATGATGATGATGATGAAGAGGAGGAGGAAGAGGATGACGATGATGAAGACGACGACGATGA
GGAGGAAGAGGAGGAGGAGGAAGAGGAGGAAGAGGAAGAAGAGCCTGTCAAAGAAGCACCTGGAAAACGAAAGAAGGAAA
TGGCCAAACAAAAAGCAGCTCCTGAAGCCAAGAAACAAAAAGTGGAAGGCACAGAACCAACTACATCTTTCAATCTCTTT
GTTGGAAATCTGAACTTCAATAAATCTGCTCCTGAATTGAAAACGGGTATCAGTGATCTTTTTGCTAAAAATGATCTTGC
TGTTGTTGATGTCAGAATTGGTGTGTCTAGGAAGTTTGGCTATGTGGATTTTGAATCTGCCGAAGACCTGGAAAAAGCCT
TGGAACTCACTGGTTTAAAAGTCTTTGGCAATGAAATTAAACTAGAAAAACCAAAGGGAAAAGACAGTAAGAAAGATCGA
GATGCAAGAACACTTCTGGCTAAAAATCTGCCTTACAAAGTTACTCAGGATGAATTAAAAGAAGTGTTTGAAGATGCTGT
GGAGATCAGATTAGTCAGCAAGGATGGAAAGAGTAAAGGGATTGCTTATATTGAATTTAAGACAGAAGCTGATGCAGAAA
AAACCTTGGAAGAAAAGCAGGGAACAGAGATAGATGGGCGATCCATTTCTCTGTACTACACCGGAGAGAAAGGTCAAAGT
CAAGACCATAGAGGTGGAAAGAACAGCACTTGGAGTGGTGAATCAAAAACCCTGGTTTTAAGCAATCTCTCCTATAGTGC
AACGGAAGAAACTCTTCAGGAAGTATTTGAGAAGGCAACTCATATCAAGGTGCCCCAGAACCAAAATGGCAAATCTAAAG
GGTATGCATTTATAGAATTTGCTTCATTTGAAGATGCTAAAGAAGCTTTAAATTCATGTAATAAAAGGGAAATTGAGGGC
AGAGCCATCAGACTGGAGTTGCAAGGACCCAGGGGATCACCTAATGCAAGAAGCCAGCCATCCAAAACTCTCTTTGTCAA
AGGTCTCTCTGAGGATACCACAGAAGAGACGTTAAAAGAGTCGTTTGATGGCTCTATTCGAGCAAGGATAGTCACTGACC
GGGAGACTGGATCCTCCAAAGGGTTTGGTTTTGTAGACTTCAACAGCGAGGAAGATGCCAAAGCTGCCAAGGAGGCCATG
GAAGATGGTGAAATCGATGGAAACAAAGTCACTTTGGACTGGGCCAAACCTAAGGGTGAAGGTGGCTTTGGTGGCCGAGG
AGGAGGCAGAGGTGGCTTTGGAGGCCGAGGTGGTGGCAGAGGTGGCCGAGGTGGCTTTGGTGGCAGAGGCCGGGGAGGCT
TTGGAGGGCGAGGAGGCTTCCGAGGAGGCAGAGGAGGAGGAGGAGACCACAAGCCACAAGGAAAGAAGACGAAGTTTGAA
TAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 165 .27 RPM |
| SRP017611_kidney | 188 .54 RPM |
| SRP017611_liver | 151 .17 RPM |
| ERP005899_muscle | 254 .65 RPM |
| ERP005899_liver | 60 .13 RPM |
| SRP030211_testis | 292 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000014547 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000027852 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009094 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1713 | 96.57 | 52.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000016174 retrocopies