Parental gene: | CD164, ENSBTAG00000017992 |
| Aliases: | None |
| Description: | Sialomucin core protein 24 [Source:UniProtKB/Swiss-Prot;Acc:Q2YDH0] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 9:41246267..41256989(+) |
>ENSBTAG00000017992
ATGTCTGGGCTGTCTCGCCCGCTGCTTTTGGCCGTCGGCTGCCTGGCCGCGCTCTGCGTAATCACAGCGGCTGGGAACAC
CACCCTGGCCCCGAACGTGACTACAGCCTCGTCTCCACCGCCCACCACCACGACAGTCCCGGTGTCACCGACGACTCTCT
CGCCGCTGCCGGTCACCACTCCAGCACCAGATATCTGTGGAAGCCGAAACAGTTGTGTTTCCTGTGTTGATGGTAATGCT
ACCTGCTTTTGGATAGAATGTAAAGGTAAAAGCTACTGTTCAGATAATTCAACAGCTGGTGATTGCAAGGTGGTGAACAC
CACAGGATTCTGTTCTGTGCCCACTACCACACCAACGCCAACCAATTCTACAGCTAAAACCACAACTCTGCCTTCCACTA
CTACAACTTCCACCACAGCTACTACATCAGGTACAACTAATACCACTCTATCTCCAACTATACAACCTACGCGGAAGTCT
ACCTTTGATGCAGCCAGTTTCATTGGAGGAATTGTCCTTGTCTTGGGTGTGCAGGCTGTAATTTTCTTTCTCTATAAATT
CTGCAAATCTAAAGAACGAAACTACCACACTCTGTAA
ATGTCTGGGCTGTCTCGCCCGCTGCTTTTGGCCGTCGGCTGCCTGGCCGCGCTCTGCGTAATCACAGCGGCTGGGAACAC
CACCCTGGCCCCGAACGTGACTACAGCCTCGTCTCCACCGCCCACCACCACGACAGTCCCGGTGTCACCGACGACTCTCT
CGCCGCTGCCGGTCACCACTCCAGCACCAGATATCTGTGGAAGCCGAAACAGTTGTGTTTCCTGTGTTGATGGTAATGCT
ACCTGCTTTTGGATAGAATGTAAAGGTAAAAGCTACTGTTCAGATAATTCAACAGCTGGTGATTGCAAGGTGGTGAACAC
CACAGGATTCTGTTCTGTGCCCACTACCACACCAACGCCAACCAATTCTACAGCTAAAACCACAACTCTGCCTTCCACTA
CTACAACTTCCACCACAGCTACTACATCAGGTACAACTAATACCACTCTATCTCCAACTATACAACCTACGCGGAAGTCT
ACCTTTGATGCAGCCAGTTTCATTGGAGGAATTGTCCTTGTCTTGGGTGTGCAGGCTGTAATTTTCTTTCTCTATAAATT
CTGCAAATCTAAAGAACGAAACTACCACACTCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 24 .99 RPM |
| SRP017611_kidney | 347 .87 RPM |
| SRP017611_liver | 143 .16 RPM |
| ERP005899_muscle | 132 .87 RPM |
| ERP005899_liver | 67 .55 RPM |
| SRP030211_testis | 75 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000007011 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015500 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004181 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_477 | 53.49 | 58.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_479 | 52.94 | 70.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_503 | 54.72 | 51.01 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000017992 retrocopies