Parental gene: | TRAF6, ENSBTAG00000036009 |
| Aliases: | None |
| Description: | TNF receptor-associated factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q3ZCC3] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 15:67768373..67789469(-) |
>ENSBTAG00000036009
ATGAGTCTGCTACACTGTGAAAACAGCTGTGGATCCAGCCAGTCCGAGAGCGACTGTTGCGCCGCCATGGCTGCCAGCTC
CTGTGGGACTGCAGCAAAAGACGACAGTGTGAGTGGGACGGCCAGCACGGTGACTCTCTCCAGCTCTTTCATGGAGGAGA
TCCAGGGGTACGACGTGGAATTTGACCCACCCCTGGAAAGCAAATATGAGTGCCCCATTTGCTTGATGGCTTTGCGGGAA
GCGGTGCAGACACCTTGCGGCCACAGGTTCTGCAAAGCCTGCATCATCAAATCAATAAGGGATGCAGGTCACAAATGTCC
AGTTGACAATGAAATACTGCTGGAAAACCAACTATTTCCTGACAATTTTGCAAAACGAGAGATTCTTTCGCTGATGGTGA
AATGTCCAAATGAAGGTTGCTTGCACAAGATGGAACTGAGGCATCTTGAGGAGCATCAAGCACACTGTGAGTTTGCTCTT
ATGAGTTGTCCGCAATGCCAGCGTCCCTTCCAGAAATGCCATCTTAATATTCATATTCTCAAGGAGTGTCCAAGGAGACA
GGTTCCTTGTGAAAACTGTGCTGTATCAATGGCATTTGAAGATAAAGAGATTCATGAGCAGAACTGTCCTTTGGCAAATG
TCATCTGTGAATACTGCAATACCATGCTCATCAGAGAACAGATGCCCAATCACTATGATCTAGACTGCCCTACAGCCCCA
GTCCCATGCACGTTCAGTGCTTTTGGTTGCCATGAAAAGATGCAGAGGAATCACTTGGCACGCCACCTGCAAGAGAATAC
CCAGTCGCATATGAGAATGATGGCCCAGGCTGTTCAGACTTTAAGCCTCGCGGTAGCTCCTGTGCCTCAATGTACCATGC
CTCTGTATGACTCTGTGCCTCCCACCCGGCCTTCCTCTGGGCGTCACTCAGAAGTCCACAATTTCCAAGAAACCATTCAA
CAGTTAGAGGGTCGCCTTGTAAGACAAGACCATCAAATCCGGGAACTGACTGCAAAAATGGAAACCCAGAGCATGTATGT
AAATGAGCTCAAGCGAACTATTCGAACCCTTGAGGACAAAGTTGCTGAAATAGAAGCACAGCAGTGCAATGGGATTTACA
TCTGGAAGATTGGCAACTTTGGGATGCACTTGAAATCGCAAGAAGAGGAGAAGCCTGTTGTCATTCACAGCCCCGGGTTC
TACACAGGCAAACCCGGCTACAAACTGTGCATGCGGCTGCACCTGCAGCTGCCGAGCGCGCAGCGCTGCGCCAACTACAT
ATCGCTCTTTGTCCACACGATGCAAGGGGAGTACGACAGCCACCTGCCGTGGCCCTTCCAGGGGACAATACGCCTTACCA
TCCTTGACCAGTCTGAAGCAGCTGTGAGGCAAAACCACGAAGAAATAATGGACGCCAAACCAGAGCTCCTGGCCTTTCAG
AGACCCACCATCCCCCGGAACCCCAAGGGTTTTGGCTACGTGACTTTTATGCATCTGGAAGCCCTCAGACAAAGAACCTT
CATCAAGGATGACACGTTATTAGTACGCTGTGAGGTCTCCACCCGCTTCGACATGGGCAGTCTTCGGAGGGAGGGTTTTC
AGCCACGGAGTACTGACTCAGGGATATAG
ATGAGTCTGCTACACTGTGAAAACAGCTGTGGATCCAGCCAGTCCGAGAGCGACTGTTGCGCCGCCATGGCTGCCAGCTC
CTGTGGGACTGCAGCAAAAGACGACAGTGTGAGTGGGACGGCCAGCACGGTGACTCTCTCCAGCTCTTTCATGGAGGAGA
TCCAGGGGTACGACGTGGAATTTGACCCACCCCTGGAAAGCAAATATGAGTGCCCCATTTGCTTGATGGCTTTGCGGGAA
GCGGTGCAGACACCTTGCGGCCACAGGTTCTGCAAAGCCTGCATCATCAAATCAATAAGGGATGCAGGTCACAAATGTCC
AGTTGACAATGAAATACTGCTGGAAAACCAACTATTTCCTGACAATTTTGCAAAACGAGAGATTCTTTCGCTGATGGTGA
AATGTCCAAATGAAGGTTGCTTGCACAAGATGGAACTGAGGCATCTTGAGGAGCATCAAGCACACTGTGAGTTTGCTCTT
ATGAGTTGTCCGCAATGCCAGCGTCCCTTCCAGAAATGCCATCTTAATATTCATATTCTCAAGGAGTGTCCAAGGAGACA
GGTTCCTTGTGAAAACTGTGCTGTATCAATGGCATTTGAAGATAAAGAGATTCATGAGCAGAACTGTCCTTTGGCAAATG
TCATCTGTGAATACTGCAATACCATGCTCATCAGAGAACAGATGCCCAATCACTATGATCTAGACTGCCCTACAGCCCCA
GTCCCATGCACGTTCAGTGCTTTTGGTTGCCATGAAAAGATGCAGAGGAATCACTTGGCACGCCACCTGCAAGAGAATAC
CCAGTCGCATATGAGAATGATGGCCCAGGCTGTTCAGACTTTAAGCCTCGCGGTAGCTCCTGTGCCTCAATGTACCATGC
CTCTGTATGACTCTGTGCCTCCCACCCGGCCTTCCTCTGGGCGTCACTCAGAAGTCCACAATTTCCAAGAAACCATTCAA
CAGTTAGAGGGTCGCCTTGTAAGACAAGACCATCAAATCCGGGAACTGACTGCAAAAATGGAAACCCAGAGCATGTATGT
AAATGAGCTCAAGCGAACTATTCGAACCCTTGAGGACAAAGTTGCTGAAATAGAAGCACAGCAGTGCAATGGGATTTACA
TCTGGAAGATTGGCAACTTTGGGATGCACTTGAAATCGCAAGAAGAGGAGAAGCCTGTTGTCATTCACAGCCCCGGGTTC
TACACAGGCAAACCCGGCTACAAACTGTGCATGCGGCTGCACCTGCAGCTGCCGAGCGCGCAGCGCTGCGCCAACTACAT
ATCGCTCTTTGTCCACACGATGCAAGGGGAGTACGACAGCCACCTGCCGTGGCCCTTCCAGGGGACAATACGCCTTACCA
TCCTTGACCAGTCTGAAGCAGCTGTGAGGCAAAACCACGAAGAAATAATGGACGCCAAACCAGAGCTCCTGGCCTTTCAG
AGACCCACCATCCCCCGGAACCCCAAGGGTTTTGGCTACGTGACTTTTATGCATCTGGAAGCCCTCAGACAAAGAACCTT
CATCAAGGATGACACGTTATTAGTACGCTGTGAGGTCTCCACCCGCTTCGACATGGGCAGTCTTCGGAGGGAGGGTTTTC
AGCCACGGAGTACTGACTCAGGGATATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 6 .53 RPM |
| SRP017611_kidney | 16 .00 RPM |
| SRP017611_liver | 12 .23 RPM |
| ERP005899_muscle | 15 .31 RPM |
| ERP005899_liver | 11 .10 RPM |
| SRP030211_testis | 15 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000175104 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005854 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017949 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003510 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_391 | 98.34 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000036009 retrocopies