>retro_nleu_782
ATGAGTCTGCTAAACTGTGAAAACAGCTGTGGATCCAGCCAGTCTGAAGGTGACTACTGTGTGGCCATGGCCAGCTCCTG
TAGCGCTGCAACAAAAAATGATAGTGTGGGTGGAACTGCCAGCACGGGGAACCTCTCCAGCTCCTTTATGGAGGAGATTC
AGGGATATGATGTAGAGTTTGGCCCACCCCTGGAAAGCAACTATGAATGCCCCATCTGCTTGATGGCATTACGAGAAGCA
GTGCAAACGCCATGCAGCCATAGGTTCTGCAAAGCCTGCATCATAAAATCAATAAGGGATGCAGGTCACAAATGTCCAGT
TGACAATGAAATACTGCTGGAAAATAAACTATTTCCAGACAATTTTGCAAAACGTGAGATTCTTTCTCTGATAACGAAGT
GTCCAAATGAAGGTTATTTGCACAAAATGGAACTGAGACATCTTGAGGATCGTCACGCACATTGTGAGTTTGCTCTTATG
GATTGTCCCCAATGCCAGTGTCCCTTCCAAAAATTCCATATTAATATTCACATTCTGAAGGATTGTCCAAGGAGGCAGGT
ATCTTGTGACAATTGTGCTGCATCAATTGCATTTGAAGATAAAGAGATCCATGACCAGAACTGTCCTTTGACAAATGTCA
TCTGTGAGTACTGCAATACTATACTCATCAGAGAACAGATGCCTAACCTTATGACCTAGACTGCCCTACGGCCCCAATTC
CATGCATATTCAGTACTTTTGGTTGCCATGAAAAGATGCGGAGGAATCACTTGGCACGCCACCTACAAGAGAACACCCAG
TCAAACATAAGAATGTTGGCCCAGGCTGTTCACAGTTTGAGCCTTATACCCGACTCTGGGTATATCTCAGAGGTCCGGAA
TTTCCAGGAAACTATTCACCAATTAGAGGGTCGCCTTGTAAGACAAGATCATCAAATCTGGGAGCTGACTGATCAAATGG
AAACTCAGAGTATGTATGTAAGTGAGCTCAAACGAACCATTCGAACCCTTGAGGACAAAGTTGCTGAAGTTGAAGCATAG
CAGTGCAATGGAATTTACATTTGGAAGACTGGGAAT
ORF - retro_nleu_782 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
92.5 % |
Parental protein coverage: |
68.77 % |
Number of stop codons detected: |
1 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | MSLLNCENSCGSSQSEGDCCVAMASSCSAATKDDSVGGTASTGNLSSSFMEEIQGYDVEFDPPLESKYEC |
| MSLLNCENSCGSSQSEGD.CVAMASSCSAATK.DSVGGTASTGNLSSSFMEEIQGYDVEF.PPLES.YEC |
Retrocopy | MSLLNCENSCGSSQSEGDYCVAMASSCSAATKNDSVGGTASTGNLSSSFMEEIQGYDVEFGPPLESNYEC |
|
Parental | PICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCL |
| PICLMALREAVQTPC.HRFCKACIIKSIRDAGHKCPVDNEILLEN.LFPDNFAKREILSL..KCPNEG.L |
Retrocopy | PICLMALREAVQTPCSHRFCKACIIKSIRDAGHKCPVDNEILLENKLFPDNFAKREILSLITKCPNEGYL |
|
Parental | HKMELRHLEDHQAHCEFALMDCPQCHRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPL |
| HKMELRHLED..AHCEFALMDCPQC..PFQKFHINIHILKDCPRRQVSCDNCAAS.AFEDKEIHDQNCPL |
Retrocopy | HKMELRHLEDRHAHCEFALMDCPQCQCPFQKFHINIHILKDCPRRQVSCDNCAASIAFEDKEIHDQNCPL |
|
Parental | ANVICEYCNTILIREQMPN-HYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHS |
| .NVICEYCNTILIREQMPN..YDLDCPTAPIPC.FSTFGCHEKM.RNHLARHLQENTQS..RMLAQAVHS |
Retrocopy | TNVICEYCNTILIREQMPN<PYDLDCPTAPIPCIFSTFGCHEKMRRNHLARHLQENTQSNIRMLAQAVHS |
|
Parental | LSLIPDSGYISEVRNFQETIHQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQC |
| LSLIPDSGYISEVRNFQETIHQLEGRLVRQDHQI.ELT..METQSMYVSELKRTIRTLEDKVAE.EA.QC |
Retrocopy | LSLIPDSGYISEVRNFQETIHQLEGRLVRQDHQIWELTDQMETQSMYVSELKRTIRTLEDKVAEVEA*QC |
|
Parental | NGIYIWKIGN |
| NGIYIWK.GN |
Retrocopy | NGIYIWKTGN |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Nomascus leucogenys was not studied using RNA-Seq expression data.
Nomascus leucogenys was not studied using ChIP-Seq data.
Nomascus leucogenys was not studied using EST data.
Nomascus leucogenys was not studied using FANTOM5 data.
retro_nleu_782 was not experimentally validated.
Retrocopy orthology:
Nomascus leucogenys does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
5 parental genes, and
5 retrocopies.