Parental gene:

TXNL1, ENSCAFG00000000137

Aliases:None
Description:thioredoxin-like 1 [Source:HGNC Symbol;Acc:12436]
Organism:Dog (Canis familiaris)
Coordinates:1:19170548..19203689(+)


>ENSCAFG00000000137
ATGGTGGGCGTGAAGCCGGTCGGGAGCGACCCGGACTTCCAGCCGGAGCTGAGCGGCGCGGGCTCCAGACTCGCCATGGT
CAAGTTCACCATGCGGGGGTGTGGACCATGTTTAAGGATTGCCCCAGCATTCAGTTCTATGAGTAATAAGTATCCACAGG
CAGTTTTCTTGGAAGTAGATGTACATCAGTGTCAGGGAACAGCTGCCACCAACAATATATCAGCAACACCTACATTTCTG
TTTTTTCGAAACAAAGTGAGAATTGATCAATATCAAGGAGCAGATGCTGTTGGATTAGAAGAAAAAATCAAGCAGCACTT
AGAAAATGACCCTGGAAGCAATGAGGACACAGATATTCCCAAAGGCTATATGGATTTAATGCCTTTTATTAACAAAGCTG
GCTGTGAATGCCTTAATGAAAGTGATGAGCATGGATTTGACAACTGTTTACGAAAAGATATGACCTTCTTGGAATCTGAT
TGTGATGAACAGCTACTTATTACTGTGGCATTTAATCAGCCTGTTAAGCTTTATTCAATGAAATTTCAAGGGCCTGATAA
TGGTCAGGGTCCTAAATATGTAAAAATTTTTATCAATCTGCCCCGATCTATGGATTTTGAAGAAGCGGAAAGAAGTGAAC
CAACTCAAGCTCTGGAACTAACAGAGGATGATATTAAAGAAGATGGCATTGTCCCACTTCGTTATGTTAAGTTTCAGAAT
GTTAACAGTGTAACTATATTTGTTCAGTCCAATCAAGGTGAAGAAGAAACAACAAGAATTTCATATTTTACTTTTATTGG
TACTCCAGTCCAGGCAACCAATATGAATGACTTCAAACGAGTAGTTGGCAAAAAAGGAGAAAGCCAC

Library Parental gene expression (RPM)
SRP017611_brain 34 .46 RPM
SRP017611_kidney 86 .24 RPM
SRP017611_liver 36 .47 RPM
SRP012049_cerebellum 37 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010262 ortholog_one2one 1 retrogene
retro_chof_1723,
Ictidomys tridecemlineatus ENSSTOG00000000075 ortholog_one2one 2 retrogenes
retro_itri_302, retro_itri_414,
Tupaia belangeri ENSTBEG00000017328 ortholog_one2one 2 retrogenes
retro_tbel_1981, retro_tbel_911,
Tursiops truncatus ENSTTRG00000001161 ortholog_one2one 1 retrogene
retro_ttru_1154,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_875 96.15 53.98
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Download FASTA sequences of all ENSCAFG00000000137 retrocopies