Parental gene:

APOC1, ENSCAFG00000004615

Aliases:APOC1, Apo-CIB, ApoC-IB
Description:Canis lupus familiaris apolipoprotein C-I (APOC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001197048]
Organism:Dog (Canis familiaris)
Coordinates:1:110520113..110522563(-)


>ENSCAFG00000004615
ATGAGGCTCATTCTGTCGCTCCCGGTTTTGGTGGTGGTTCTGTCGATGGTTTTGGAAGGTCCAGCCCCCGCCCAGGCGGC
CGGAGAAATCTCCAGCACTTTTGAGCGCATCCCGGATAAGCTGAAGGAGTTTGGTAACACCCTGGAAGACAAGGCCCGGG
CAGCCATTGAGAGCATCAAGAAGAGCGACATTCCTGCAAAGACCCGAAACTGGTTTTCTGAGGCTTTCAAGAAAGTGAAG
GAGCATCTCAAAACTGCCTTCTCCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 16 .72 RPM
SRP017611_brain 2 .46 RPM
SRP017611_kidney 1 .72 RPM
SRP017611_liver 1585 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012737 ortholog_one2one 1 retrogene
retro_amel_582,
Otolemur garnettii ENSOGAG00000028159 ortholog_one2one 1 retrogene
retro_ogar_2801,
Rattus norvegicus ENSRNOG00000018426 ortholog_one2many 1 retrogene
retro_rnor_204,
Tupaia belangeri ENSTBEG00000007093 ortholog_one2one 2 retrogenes
retro_tbel_1243, retro_tbel_2226,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_530 72.73 98.86
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Download FASTA sequences of all ENSCAFG00000004615 retrocopies