Parental gene:

LAMTOR1, ENSCAFG00000005788

Aliases:None
Description:late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:HGNC Symbol;Acc:26068]
Organism:Dog (Canis familiaris)
Coordinates:21:25981307..25986399(+)


>ENSCAFG00000005788
ATGGGGTGCTGCTACAGCAGCGAGAACGAGGACTCGGACCAGGACCGAGAGGAACGGAAGCTGCTGCTGGACCCTAGCAG
CCCCCCTACCAAAGCCCTCAATGGAGCTGAGCCCAACTACCACAGCCTGCCTCCCACCCGCACAGATGAGCAGGCCCTGC
TCTCCTCCATCCTTGCTAAAACAGCCAGCAACATCATTGACGTGTCTGCTGCGGACTCCCAGGGCATGGAGCAGCATGAG
TACATGGATCGGGCAAGGCAGTACAGCACCCGCTTGGCTGTGCTGAGCAGCAGCCTGACCCACTGGAAGAAGCTGCCACC
GCTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGCGAGCCCATCCCCTTCTCCGATTTGCAGCAGGTCTCCA
GGATAGCTGCTTATGCCTACAGTGCACTTTCTCAGATCCGAGTGGACGCAAAAGAGGAGCTGGTTGTACAGTTTGGGATC
CCA

Library Parental gene expression (RPM)
SRP017611_brain 20 .32 RPM
SRP017611_kidney 37 .84 RPM
SRP017611_liver 12 .62 RPM
SRP012049_cerebellum 24 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010854 ortholog_one2one 2 retrogenes
retro_amel_1176, retro_amel_436,
Echinops telfairi ENSETEG00000010979 ortholog_one2one 1 retrogene
retro_etel_1005,
Felis catus ENSFCAG00000005320 ortholog_one2one 2 retrogenes
retro_fcat_142, retro_fcat_496,
Macropus eugenii ENSMEUG00000003560 ortholog_one2many 1 retrogene
retro_meug_17,
Myotis lucifugus ENSMLUG00000014117 ortholog_one2one 1 retrogene
retro_mluc_2372,
Mustela putorius furo ENSMPUG00000010289 ortholog_one2one 3 retrogenes
retro_mputfur_1178, retro_mputfur_270, retro_mputfur_455,
Tarsius syrichta ENSTSYG00000014730 ortholog_one2many 2 retrogenes
retro_tsyr_1324, retro_tsyr_33,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1962 58.79 100.00
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Download FASTA sequences of all ENSCAFG00000005788 retrocopies