Parental gene: | MYL9, ENSCAFG00000008540 |
| Aliases: | None |
| Description: | Canis lupus familiaris myosin, light chain 9, regulatory (MYL9), mRNA. [Source:RefSeq mRNA;Acc:NM_001252166] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 24:25322799..25333505(+) |
>ENSCAFG00000008540
ATGTCCAGTAAGCGGGCCAAGGCCAAAACCACCAAGAAGCGGCCACAGCGGGCCACTTCCAATGTCTTCGCGATGTTTGA
CCAGTCCCAGATCCAGGAGTTTAAGGAGGCCTTCAACATGATTGACCAGAACCGAGATGGCTTCATTGACAAGGAGGACT
TGCATGACATGCTGGCCTCACTGGGAAAGAACCCCACCGATGAGTACCTCGAGGGCATGATGAGTGAGGCCCCAGGGCCC
ATCAACTTCACCATGTTTCTCACCATGTTTGGGGAGAAGCTGAATGGCACAGACCCTGAAGATGTGATCCGAAACGCCTT
TGCCTGCTTCGATGAGGAGGCCTCAGGTTTTATCCATGAGGACCACCTTCGGGAGCTGCTCACCACCATGGGTGACCGCT
TCACGGACGAGGAAGTGGACGAGATGTACCGAGAGGCACCCATTGATAAGAAAGGCAACTTCAACTACGTGGAGTTCACC
CGCATTCTCAAGCATGGTGCCAAGGACAAGGACGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 10 .67 RPM |
| SRP017611_brain | 17 .39 RPM |
| SRP017611_kidney | 201 .81 RPM |
| SRP017611_liver | 16 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000029134 | within_species_paralog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000032168 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012890 | ortholog_one2one | 4 retrogenes | |
| Equus caballus | ENSECAG00000007545 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000101335 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000024477 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000207 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006109 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010971 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013458 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1384 | 91.91 | 100.00 | Please wait, loading  |
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| 2. | retro_cfam_2066 | 93.64 | 100.00 | Please wait, loading |
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| 3. | retro_cfam_2071 | 94.96 | 80.23 | Please wait, loading |
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Download FASTA sequences of all ENSCAFG00000008540 retrocopies