Parental gene: | PFKM, ENSCAFG00000009035 |
| Aliases: | PFKM, M-PFK |
| Description: | Canis lupus familiaris phosphofructokinase, muscle (PFKM), mRNA. [Source:RefSeq mRNA;Acc:NM_001003199] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 27:6620299..6662614(-) |
>ENSCAFG00000009035
ATGCGTAAAGAGGAATTTCATCTGAAATTTTTCATGTGTGTGATTGAGTCTCGCGGGTTAGTCAGGACTCCTCAGAGCAC
AGCTCGGGAAGCTTCAACTTCCAGCATGCTCATACAAAAGCCACCACCTGAGACAGACGACTTGAAGCATCTACATGCTG
TGGATGATCCAACCACCAAGGAAGGCATACCTATTTTGAAAAATGAGTGGATCATGACCCATGAAGAGCACCATGCAGCC
AAAACCCTGGGGATCGGCAAAGCCATCGCCGTGTTAACCTCTGGTGGAGATGCCCAAGGTATGAATGCTGCTGTCAGGGC
TGTGGTTCGAGTGGGTATCTTTACTGGTGCCCGTGTCTTCTTTGTCCATGAGGGTTACCAAGGCCTGGTGGATGGTGGAG
ATCACATCAGGGAAGCCACCTGGGAGAGCGTTTCGATGATGCTTCAGCTGGGTGGCACAGTCATTGGAAGTGCCCGGTGC
AAGGATTTTCGGGAACGAGAGGGGCGACTTCGAGCTGCCCACAACCTAGTGAAACGTGGGATCACCAATCTGTGTGTCAT
CGGGGGTGATGGCAGCCTCACTGGGGCGGACACCTTCCGTTCTGAGTGGAGTGACTTGCTGAGTGACCTCCAGAAAGCGG
GTAAGATCACAGCGGAGGAGGCTACGAAGTCCAGCTACCTGAATATCGTGGGCTTGGTGGGCTCAATTGACAATGACTTT
TGCGGCACTGACATGACCATCGGCACCGACTCTGCCCTGCACCGGATCATAGAGATCGTGGATGCCATCACCACTACTGC
TCAGAGCCACCAGAGGACGTTTGTGTTGGAAGTGATGGGCCGGCACTGTGGATACCTGGCCCTTGTCACCTCCCTCTCCT
GTGGGGCTGACTGGGTTTTTATTCCTGAATGTCCGCCAGATGATGACTGGGAGGAACATCTTTGTCGCCGGCTTAGTGAG
ACAAGGACCCGGGGTTCTCGTCTCAACATCATCATTGTGGCTGAGGGTGCGATTGACAAGAATGGGAAACCAATCACCTC
AGAAGAAATCAAGGAGCTGGTGGTAAAGCGTCTGGGATATGACACTCGGGTCACTGTCTTGGGGCATGTGCAGCGGGGTG
GGACCCCATCAGCCTTCGACCGAATCCTGGGCAGCAGGATGGGTGTGGAAGCAGTGATGGCGCTCTTGGAGGGGACCCCG
GACACCCCGGCCTGCGTGGTGAGCCTCTCTGGTAACCAGGCTGTGCGCCTGCCCCTCATGGAGTGTGTACAGGTGACCAA
GGATGTGACCAAGGCCATGAATGACAGGAAATTCGATGAAGCCATGAAGCTGAGAGGCCGGAGCTTCATGAACAACTGGG
AGGTGTACAAGCTTCTGGCTCACATCAGACCTCCCGTCTCGAAGACATCGGCTACCATGCACACGGTGGCCGTGATGAAC
GTGGGTGCCCCAGCCGCAGGCATGAATGCTGCCGTCCGCTCCACCGTGAGAATTGGACTCATCCAGGGCAACCGGGTGCT
GGTTGTGCATGATGGCTTCGAGGGCCTGGCCAAGGGTCAGATCGAGGAGGCTGGCTGGAGCTATGTGGGGGGCTGGACTG
GCCAAGGCGGTTCCAAACTTGGGACTAAGAGGACTCTGCCCAAGAAGAGCTTTGAGCAGATCAGTGCCAACATCACTAAG
TTTAACATTCAGGGCCTGATCATCATCGGGGGCTTTGAGGCTTACACTGGGGGCCTGGAGCTGATGGAGGGCAGGAAGCA
GTTTGATGAGCTGTGCATCCCGTTTGTGGTCATCCCTGCTACGGTGTCCAACAACGTCCCTGGCTCGGACTTCAGCGTGG
GCGCTGACACAGCCCTCAACACTATCTGCACGACCTGTGACCGCATCAAGCAGTCAGCAGCAGGCACCAAGCGGCGGGTG
TTCATCATTGAAACTATGGGTGGCTACTGCGGCTACCTGGCCACCATGGCAGGCCTGGCCGCTGGGGCGGATGCTGCCTA
CATTTTTGAGGAGCCCTTCACCATTCGGGACCTGCAGGCAAATGTTGAACATCTGGTGCAAAAGATGAAAACAACTGTGA
AGAGGGGCCTGGTGTTAAGGAATGAGAAGTGCAATGAGAACTATACCACGGACTTCATTTTCAACCTGTACTCTGAGGAG
GGGAAGGGCATCTTCGACAGCAGGAAGAATGTGCTCGGCCACATGCAGCAGGGTGGGAGCCCAACTCCATTTGATAGGAA
TTTTGCCACTAAGATGGGCGCCAAGGCTATGAACTGGATGTCTGGGAAAATCAAAGAGAGTTACCGTAATGGGAGGATCT
TTGCCAATACGCCAGACTCGGGCTGTGTTCTGGGGATGCGTAAGAGGGCTCTGGTCTTTCAACCAGTGACTGAGCTGAAG
GACCAGACAGATTTTGATCACCGCATCCCCAAGGAACAGTGGTGGCTGAAGCTGAGGCCCATCCTCAAAATCCTAGCCAA
GTACGAGATTGACTTGGACACCACAGAGCACGCCCACCTGGAGCACATCAGTCGGAAGCGATCTGGAGAAACTTCTATCT
AA
ATGCGTAAAGAGGAATTTCATCTGAAATTTTTCATGTGTGTGATTGAGTCTCGCGGGTTAGTCAGGACTCCTCAGAGCAC
AGCTCGGGAAGCTTCAACTTCCAGCATGCTCATACAAAAGCCACCACCTGAGACAGACGACTTGAAGCATCTACATGCTG
TGGATGATCCAACCACCAAGGAAGGCATACCTATTTTGAAAAATGAGTGGATCATGACCCATGAAGAGCACCATGCAGCC
AAAACCCTGGGGATCGGCAAAGCCATCGCCGTGTTAACCTCTGGTGGAGATGCCCAAGGTATGAATGCTGCTGTCAGGGC
TGTGGTTCGAGTGGGTATCTTTACTGGTGCCCGTGTCTTCTTTGTCCATGAGGGTTACCAAGGCCTGGTGGATGGTGGAG
ATCACATCAGGGAAGCCACCTGGGAGAGCGTTTCGATGATGCTTCAGCTGGGTGGCACAGTCATTGGAAGTGCCCGGTGC
AAGGATTTTCGGGAACGAGAGGGGCGACTTCGAGCTGCCCACAACCTAGTGAAACGTGGGATCACCAATCTGTGTGTCAT
CGGGGGTGATGGCAGCCTCACTGGGGCGGACACCTTCCGTTCTGAGTGGAGTGACTTGCTGAGTGACCTCCAGAAAGCGG
GTAAGATCACAGCGGAGGAGGCTACGAAGTCCAGCTACCTGAATATCGTGGGCTTGGTGGGCTCAATTGACAATGACTTT
TGCGGCACTGACATGACCATCGGCACCGACTCTGCCCTGCACCGGATCATAGAGATCGTGGATGCCATCACCACTACTGC
TCAGAGCCACCAGAGGACGTTTGTGTTGGAAGTGATGGGCCGGCACTGTGGATACCTGGCCCTTGTCACCTCCCTCTCCT
GTGGGGCTGACTGGGTTTTTATTCCTGAATGTCCGCCAGATGATGACTGGGAGGAACATCTTTGTCGCCGGCTTAGTGAG
ACAAGGACCCGGGGTTCTCGTCTCAACATCATCATTGTGGCTGAGGGTGCGATTGACAAGAATGGGAAACCAATCACCTC
AGAAGAAATCAAGGAGCTGGTGGTAAAGCGTCTGGGATATGACACTCGGGTCACTGTCTTGGGGCATGTGCAGCGGGGTG
GGACCCCATCAGCCTTCGACCGAATCCTGGGCAGCAGGATGGGTGTGGAAGCAGTGATGGCGCTCTTGGAGGGGACCCCG
GACACCCCGGCCTGCGTGGTGAGCCTCTCTGGTAACCAGGCTGTGCGCCTGCCCCTCATGGAGTGTGTACAGGTGACCAA
GGATGTGACCAAGGCCATGAATGACAGGAAATTCGATGAAGCCATGAAGCTGAGAGGCCGGAGCTTCATGAACAACTGGG
AGGTGTACAAGCTTCTGGCTCACATCAGACCTCCCGTCTCGAAGACATCGGCTACCATGCACACGGTGGCCGTGATGAAC
GTGGGTGCCCCAGCCGCAGGCATGAATGCTGCCGTCCGCTCCACCGTGAGAATTGGACTCATCCAGGGCAACCGGGTGCT
GGTTGTGCATGATGGCTTCGAGGGCCTGGCCAAGGGTCAGATCGAGGAGGCTGGCTGGAGCTATGTGGGGGGCTGGACTG
GCCAAGGCGGTTCCAAACTTGGGACTAAGAGGACTCTGCCCAAGAAGAGCTTTGAGCAGATCAGTGCCAACATCACTAAG
TTTAACATTCAGGGCCTGATCATCATCGGGGGCTTTGAGGCTTACACTGGGGGCCTGGAGCTGATGGAGGGCAGGAAGCA
GTTTGATGAGCTGTGCATCCCGTTTGTGGTCATCCCTGCTACGGTGTCCAACAACGTCCCTGGCTCGGACTTCAGCGTGG
GCGCTGACACAGCCCTCAACACTATCTGCACGACCTGTGACCGCATCAAGCAGTCAGCAGCAGGCACCAAGCGGCGGGTG
TTCATCATTGAAACTATGGGTGGCTACTGCGGCTACCTGGCCACCATGGCAGGCCTGGCCGCTGGGGCGGATGCTGCCTA
CATTTTTGAGGAGCCCTTCACCATTCGGGACCTGCAGGCAAATGTTGAACATCTGGTGCAAAAGATGAAAACAACTGTGA
AGAGGGGCCTGGTGTTAAGGAATGAGAAGTGCAATGAGAACTATACCACGGACTTCATTTTCAACCTGTACTCTGAGGAG
GGGAAGGGCATCTTCGACAGCAGGAAGAATGTGCTCGGCCACATGCAGCAGGGTGGGAGCCCAACTCCATTTGATAGGAA
TTTTGCCACTAAGATGGGCGCCAAGGCTATGAACTGGATGTCTGGGAAAATCAAAGAGAGTTACCGTAATGGGAGGATCT
TTGCCAATACGCCAGACTCGGGCTGTGTTCTGGGGATGCGTAAGAGGGCTCTGGTCTTTCAACCAGTGACTGAGCTGAAG
GACCAGACAGATTTTGATCACCGCATCCCCAAGGAACAGTGGTGGCTGAAGCTGAGGCCCATCCTCAAAATCCTAGCCAA
GTACGAGATTGACTTGGACACCACAGAGCACGCCCACCTGGAGCACATCAGTCGGAAGCGATCTGGAGAAACTTCTATCT
AA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 280 .33 RPM |
| SRP017611_kidney | 49 .00 RPM |
| SRP017611_liver | 2 .25 RPM |
| SRP012049_cerebellum | 272 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000009077 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005501 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1463 | 94.47 | 54.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000009035 retrocopies