Parental gene: | AP2M1, ENSCAFG00000012257 |
| Aliases: | None |
| Description: | adaptor-related protein complex 2, mu 1 subunit [Source:HGNC Symbol;Acc:564] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 34:17073417..17079971(+) |
>ENSCAFG00000012257
GCTGCCGCCATGATTGGAGGCTTATTCATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACAT
CGGGAGGAATGCAGTGGATGCCTTTCGAGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCCCGTCACCAACATCG
CTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGTTGGCAGCTGTCACCAAGCAAAATGTCAATGCTGCCATG
GTCTTCGAATTCCTCTATAAGATGTGTGATGTAATGGCTGCCTACTTTGGCAAGATCAGCGAGGAGAACATCAAGAACAA
TTTTGTGCTCATATATGAGCTACTGGATGAGATCCTGGACTTTGGCTATCCACAGAATTCAGAGACAGGAGCACTGAAAA
CCTTCATCACTCAGCAGGGTATCAAGAGCCAGACAAAAGAAGAGCAATCCCAGATCACCAGCCAGGTGACTGGGCAGATT
GGCTGGCGGCGGGAGGGCATCAAGTATCGCCGGAATGAGCTCTTTTTGGATGTGCTGGAAAGTGTGAACCTCCTCATGTC
CCCACAGGGGCAGGTGCTGAGTGCCCATGTGTCAGGCCGGGTGGTGATGAAGAGCTACCTGAGTGGCATGCCTGAATGCA
AGTTTGGGATGAATGACAAGATTGTCATTGAGAAGCAAGGCAAAGGCACAGCTGATGAAACAAGCAAGAGTGGAAAGCAA
TCAATTGCCATCGATGACTGCACCTTCCACCAGTGTGTGCGACTCAGCAAGTTTGACTCTGAACGCAGCATCAGCTTCAT
CCCACCAGATGGAGAGTTTGAGCTAATGAGGTATCGCACCACCAAGGACATCATCCTTCCTTTCCGGGTGATCCCACTAG
TGCGAGAAGTGGGACGTACCAAGCTGGAGGTCAAGGTGGTCATCAAATCCAATTTCAAACCCTCTTTACTGGCTCAGAAG
ATTGAGGTGAGGATCCCAACTCCACTGAATACAAGCGGAGTACAGGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGC
CAGCGAGAACGCCATCGTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCGCAGATCAGCGCAGAGATTGAACTTC
TGCCCACCAATGACAAGAAGAAATGGGCTCGACCCCCCATTTCCATGAACTTTGAGGTGCCATTCGCACCCTCTGGCCTC
AAGGTGCGCTACTTGAAGGTGTTTGAACCGAAGCTGAACTACAGCGACCATGATGTCATCAAATGGGTGCGCTACATTGG
CCGCAGCGGCATTTATGAGACCCGCTGCTAG
GCTGCCGCCATGATTGGAGGCTTATTCATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACAT
CGGGAGGAATGCAGTGGATGCCTTTCGAGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCCCGTCACCAACATCG
CTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGTTGGCAGCTGTCACCAAGCAAAATGTCAATGCTGCCATG
GTCTTCGAATTCCTCTATAAGATGTGTGATGTAATGGCTGCCTACTTTGGCAAGATCAGCGAGGAGAACATCAAGAACAA
TTTTGTGCTCATATATGAGCTACTGGATGAGATCCTGGACTTTGGCTATCCACAGAATTCAGAGACAGGAGCACTGAAAA
CCTTCATCACTCAGCAGGGTATCAAGAGCCAGACAAAAGAAGAGCAATCCCAGATCACCAGCCAGGTGACTGGGCAGATT
GGCTGGCGGCGGGAGGGCATCAAGTATCGCCGGAATGAGCTCTTTTTGGATGTGCTGGAAAGTGTGAACCTCCTCATGTC
CCCACAGGGGCAGGTGCTGAGTGCCCATGTGTCAGGCCGGGTGGTGATGAAGAGCTACCTGAGTGGCATGCCTGAATGCA
AGTTTGGGATGAATGACAAGATTGTCATTGAGAAGCAAGGCAAAGGCACAGCTGATGAAACAAGCAAGAGTGGAAAGCAA
TCAATTGCCATCGATGACTGCACCTTCCACCAGTGTGTGCGACTCAGCAAGTTTGACTCTGAACGCAGCATCAGCTTCAT
CCCACCAGATGGAGAGTTTGAGCTAATGAGGTATCGCACCACCAAGGACATCATCCTTCCTTTCCGGGTGATCCCACTAG
TGCGAGAAGTGGGACGTACCAAGCTGGAGGTCAAGGTGGTCATCAAATCCAATTTCAAACCCTCTTTACTGGCTCAGAAG
ATTGAGGTGAGGATCCCAACTCCACTGAATACAAGCGGAGTACAGGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGC
CAGCGAGAACGCCATCGTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCGCAGATCAGCGCAGAGATTGAACTTC
TGCCCACCAATGACAAGAAGAAATGGGCTCGACCCCCCATTTCCATGAACTTTGAGGTGCCATTCGCACCCTCTGGCCTC
AAGGTGCGCTACTTGAAGGTGTTTGAACCGAAGCTGAACTACAGCGACCATGATGTCATCAAATGGGTGCGCTACATTGG
CCGCAGCGGCATTTATGAGACCCGCTGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 421 .18 RPM |
| SRP017611_kidney | 258 .60 RPM |
| SRP017611_liver | 82 .59 RPM |
| SRP012049_cerebellum | 390 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020106 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002558 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000022841 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004556 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012286 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001709 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008493 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1923 | 92.89 | 99.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_2028 | 92.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012257 retrocopies