Parental gene:

WDR12, ENSCAFG00000012519

Aliases:None
Description:WD repeat domain 12 [Source:HGNC Symbol;Acc:14098]
Organism:Dog (Canis familiaris)
Coordinates:37:11763112..11786235(-)


>ENSCAFG00000012519
ATGGCCCAGCTCCAGACACGCTTCTTCACTGACAACAAGAAATATGTGGTAGATGATGTACCCTTCTCAATTCCTGCAGC
CTCTGAAATTGCTGACCTTAGTAACATCATCAATAAATTGCTGGAGGCCAAAAATGAGTTCCACAAACATGTGGAGTTCG
ATTTCCTTATCAAGGGCCAGTTTCTCCGGTTGCCCTTGCTCAAACACATGGAACTGGAAAACATCTCATCAGAAGAGGTT
GTGGAACTGGAATATGTGGAGAAGTACACTGCACCTCAGCCAGAGCAATGCTTGTTCCACGATGACTGGATCAGTTCAGT
CAGAGGGGCAGAGGAATGGATCTTGACTGGTTCTTATGATAAGACTTCTCGGATCTGGTCCTTGGAAGGAAAGTCAATAA
TGACAATTGTGGGACATACAGATGTTGTAAAAGATGTGGCCTGGGTGAAAAAAGATAATTTGTCTTGCCTACTACTGAGT
TCCTCTATGGATCAAACTATTCTCTTATGGGAGTGGAATGTGGAGAGAAACAAAGTGAAAGCCCTGCACTGCTGCAGGGG
TCATGCTGGAAGTGTGGATTCTATAGCTGTTGATAGCACGGGAACTAAATTTTGCAGTGGCTCCTGGGATAAGATGCTAA
AGATCTGGTCTGCAGTTCCTACAGATGAAGAGGATGAATTGGAGGAACCCACAAATCGACCAAGAAAGAAACAGAAAACA
GAACAGTTGGGACTGACAAGGACTCCTATAGTGACCCTCTCTGGCCACAAGGAAGCAATTTCCTCGGTTCTTTGGTCAGA
TGCTGAAGAAATCTGCAGTGCATCTTGGGACCACACAATTAGAGTATGGGATGTAGAGTCTGGCAGTCTTAAGTCAACTC
TGACAGGAAATAAAGTGTTTAATTGTATCTCCTATTCTCCACTTTGTAAACGTTTAGCATCTGGAAGCACAGATAGACAT
ATCCGACTGTGGGATCCCCGAACTAAAGATGGTTCTTTGGTGTCGCTGTCCCTGACCTCACATACAGGCTGGGTCACATC
ATTAAAGTGGTCTCCTACCCATGAGCAGCAGCTGATTTCAGGCTCTTTAGATAACATTGTCAAACTGTGGGATACAAGGA
GTTGTAAAGCTCCTCTCTATGATCTGGCTGCTCATGAAGACAAAGTTCTGAGCGTAGACTGGACAGACACAGGGTTACTT
CTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGATATTCACCTACTACTTCTCACGTGGGAGCATGA

Library Parental gene expression (RPM)
SRP017611_brain 18 .10 RPM
SRP017611_kidney 9 .91 RPM
SRP017611_liver 3 .48 RPM
SRP012049_cerebellum 20 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013851 ortholog_one2one 1 retrogene
retro_chof_118,
Callithrix jacchus ENSCJAG00000005171 ortholog_one2one 1 retrogene
retro_cjac_2690,
Cavia porcellus ENSCPOG00000008824 ortholog_one2one 1 retrogene
retro_cpor_1107,
Homo sapiens ENSG00000138442 ortholog_one2one 1 retrogene
retro_hsap_1615,
Gorilla gorilla ENSGGOG00000026073 ortholog_one2many 1 retrogene
retro_ggor_1222,
Loxodonta africana ENSLAFG00000011955 ortholog_one2one 1 retrogene
retro_lafr_1102,
Mus musculus ENSMUSG00000026019 ortholog_one2one 3 retrogenes
retro_mmus_1394, retro_mmus_2649, retro_mmus_2897,
Nomascus leucogenys ENSNLEG00000007018 ortholog_one2one 1 retrogene
retro_nleu_2743,
Pongo abelii ENSPPYG00000013089 ortholog_one2one 1 retrogene
retro_pabe_1327,
Pan troglodytes ENSPTRG00000012823 ortholog_one2one 1 retrogene
retro_ptro_1083,
Tursiops truncatus ENSTTRG00000001231 ortholog_one2one 1 retrogene
retro_ttru_1380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1759 93.59 91.73
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Download FASTA sequences of all ENSCAFG00000012519 retrocopies