Parental gene:

WDR12, ENSPTRG00000012823

Aliases:None
Description:Pan troglodytes WD repeat domain 12 (WDR12), mRNA. [Source:RefSeq mRNA;Acc:NM_001246511]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:207670847..207702157(-)


>ENSPTRG00000012823
ATGGCTCAGCTCCAAACACGCTTCTACACTGATAACAAGAAATATGCCGTAGATGATGTTCCCTTCTCAATCCCTGCTGC
CTCTGAAATTGCCGACCTTAGTAACATCATCAATAAACTACTAAAGGACAAAAATGAGTTCCACAAACATGTGGAGTTTG
ATTTCCTTATTAAGGGCCAGTTTCTGCGAATGCCCTTGGACAAACACATGGAAATGGAGAACATCTCATCAGAAGAAGTT
GTGGAAATAGAATACGTGGAGAAGTATACTGCGCCCCAGCCAGAGCAATGCATGTTCCATGATGACTGGATCAGTTCAAT
TAAAGGGGCAGAGGAATGGATCTTGACTGGTTCTTATGATAAGACTTCTCGGATCTGGTCCTTGGAAGGAAAGTCAATAA
TGACAATTGTGGGACATACGGATGTTGTAAAAGATGTGGCCTGGGTGAAAAAAGATAGTTTGTCCTGCTTATTATTGAGT
GCTTCTATGGATCAGACTATTCTCTTATGGGAGTGGAATGTAGAGAGAAACAAAGTGAAAGCCCTACACTGCTGTAGAGG
TCATGCTGGAAGTGTAGATTCTATAGCTGTTGATGGCTCAGGAACTAAATTTTGCAGTGGCTCCTGGGATAAGATGCTAA
AGATCTGGTCTACAGTCCCTACAGATGAAGAAGATGAAATGGAGGAGTCCACAAATCGACCAAGAAAGAAACAGAAGACA
GAACAGTTGGGACTAACAAGGACTCCCATAGTGACCCTCTCTGGCCACATGGAGGCAGTTTCCTCAGTTCTGTGGTCAGA
TGCTGAAGAAATCTGCAGTGCATCTTGGGACCATACAATTAGAGTGTGGGATGTTGAGTCTGGCAGTCTTAAGTCAACTT
TGACAGGAAATAAAGTGTTTAATTGTATTTCCTATTCTCCACTTTGTAAACGTTTAGCATCTGGAAGCACAGATAGGCAT
ATCAGACTGTGGGATCCCCGAACTAAAGATGGTTCTTTGGTGTCGCTGTCCCTAACGTCACATACTGGTTGGGTGACATC
AGTAAAATGGTCTCCTACCCATGAACAGCAGCTGATTTCAGGATCTTTAGATAACATTGTTAAGCTGTGGGATACAAGAA
GTTGTAAGGCTCCTCTCTATGATCTGGCTGCTCATGAAGACAAAGTTCTGAGTGTAGACTGGACAGACACAGGGCTACTT
CTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGATATTCACCTACCACTTCCCATGTTGGGGCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .15 RPM
SRP007412_cerebellum 16 .17 RPM
SRP007412_heart 11 .95 RPM
SRP007412_kidney 14 .38 RPM
SRP007412_liver 8 .41 RPM
SRP007412_testis 49 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012519 ortholog_one2one 1 retrogene
retro_cfam_1759,
Choloepus hoffmanni ENSCHOG00000013851 ortholog_one2one 1 retrogene
retro_chof_118,
Callithrix jacchus ENSCJAG00000005171 ortholog_one2one 1 retrogene
retro_cjac_2690,
Cavia porcellus ENSCPOG00000008824 ortholog_one2one 1 retrogene
retro_cpor_1107,
Homo sapiens ENSG00000138442 ortholog_one2one 1 retrogene
retro_hsap_1615,
Gorilla gorilla ENSGGOG00000026073 ortholog_one2one 1 retrogene
retro_ggor_1222,
Loxodonta africana ENSLAFG00000011955 ortholog_one2one 1 retrogene
retro_lafr_1102,
Mus musculus ENSMUSG00000026019 ortholog_one2one 3 retrogenes
retro_mmus_1394, retro_mmus_2649, retro_mmus_2897,
Nomascus leucogenys ENSNLEG00000007018 ortholog_one2one 1 retrogene
retro_nleu_2743,
Pongo abelii ENSPPYG00000013089 ortholog_one2one 1 retrogene
retro_pabe_1327,
Tursiops truncatus ENSTTRG00000001231 ortholog_one2one 1 retrogene
retro_ttru_1380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1083 83.63 53.19
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Download FASTA sequences of all ENSPTRG00000012823 retrocopies