Parental gene: | TDRKH, ENSCAFG00000012856 |
| Aliases: | None |
| Description: | tudor and KH domain containing [Source:HGNC Symbol;Acc:11713] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 17:60783374..60807879(-) |
>ENSCAFG00000012856
ATGTCCACTGAACGAACTTCTTGGACAAGTTTGTCCACTATTCAGAAAATAGCACTGGGCCTTGGGATCCCAGCCAGCGC
AACGGTTGCCTATATCCTATACCGCAGATACAGGGAAAGCAGAGAAGAGCGGTTGACATTTGTTGGGGAGGACGACATCG
AAATAGAGATGCGAGTTCCCCAGGAGGCTGTGAAGCTCATCATTGGCCGGCAAGGAACCAATATTAAACAGCTACGGAAA
CAGACAGGTGCTCGGATTGATGTGGACACAGAGGATGTAGGTGATGAGCGGGTGCTGCTTATCAGTGGGTTTCCTGTTCA
GGTGTGCAAGGCCAAAGCAGCCATCCATCAGATCCTGACAGAGAATACCCCAGTGTCTGAGCAGCTCTCAGTTCCCCAGA
GATCCGTGGGCAGGATCATAGGGAGAGGTGGGGAGACGATTCGTTCTATCTGTAAGGCCTCTGGAGCCAAAATTACCTGT
GACAAAGAATCAGAGGGGACGTTACTACTATCAAGACTTATCAAAATCTCAGGAACACAGAAGGAAGTGGCAGCAGCCAA
GCATTTGATACTGGAGAAAGTTTCAGAAGATGAAGAACTTCGGAAGAGAATTGCCCATTCTGCAGAAACCAGAGTCCCAC
GCAAACAGCCAATCAGTGTAAGAAGAGAGGAAGTCACCGAGTCTGGTGGAGCTGGAGAGCCAGCTTTGTGGAAAAACACT
GGTACTGGCACAGAGCCAGAGCCAGCTACGACGCCACTGGGAGCTCCTTCCCAAAAAGGAGGTGGTGACATGGCTGGTGT
AGGGCCAGAAGGTGCTTGGGAGAAACCCAATGGTGACAACTTTCAGAAATCTGGAGTCCAGACCAGTCCTGAGATGTCCA
TGTTTGAAATCCCTAGTCCTGACTTCAGTTTTCATGCCGATGAGTTCCTGGAAGTCTACGTCTCTGCCTCCGAACATCCC
AACCACTTCTGGATCCAAATCATTGGCTCCCGCAGCCTGCAGCTGGATAAGCTTGTCAGTGAGATGACCCAGCACTATGA
GAATAGTCTACCTGAAGACTTGACTGTGCATGTGGGAGACATTGTAGCAGCACCTTTACCTACAAACGGTTCCTGGTATC
GAGCTCGGGTCCTTGGCACCTTGGAGAATGGGAACCTGGACCTGTACTTCGTTGACTTTGGAGATAATGGAGATTGCCCA
CTGAAGGACCTCCGAGCACTCAGGAGTGACTTCCTAAGCCTTCCATTTCAAGCAATAGAGTGTAGTCTGGCACGGATCGC
CCCTTCAGGTGAACAGTGGGAAGAGGAAGCTTTGGATGAGTTTGACAGACTGACTCACTGTGCTGACTGGAAGCCCCTGA
TGGCCAAGATCTCCAGCTATGTCCAGACTGGTATCTCAACTTGGCCCAAGATTTACTTATATGATACTAGCAATGGGAAG
AAACTTGATATTGGGTTAGAATTAGTTCGTAAAGGATATGCAGTTGAGCTTCCCGAAGACATGGAAGAAACCAGAGCTGT
CCCAGACATGTTGCACGATGTGGCCACAGAAACAGATGTCTCTCTTGGCAGCATGCTCACTGAGCCCAAGAAGAGCCCTG
GAGAGATAGCAAATACCCTGTCTTGCCTCAGCTTATCAGAAGCTGCCTCTATGTCTGGTGATGATAACCTGGAAGATGAC
TACTTACTC
ATGTCCACTGAACGAACTTCTTGGACAAGTTTGTCCACTATTCAGAAAATAGCACTGGGCCTTGGGATCCCAGCCAGCGC
AACGGTTGCCTATATCCTATACCGCAGATACAGGGAAAGCAGAGAAGAGCGGTTGACATTTGTTGGGGAGGACGACATCG
AAATAGAGATGCGAGTTCCCCAGGAGGCTGTGAAGCTCATCATTGGCCGGCAAGGAACCAATATTAAACAGCTACGGAAA
CAGACAGGTGCTCGGATTGATGTGGACACAGAGGATGTAGGTGATGAGCGGGTGCTGCTTATCAGTGGGTTTCCTGTTCA
GGTGTGCAAGGCCAAAGCAGCCATCCATCAGATCCTGACAGAGAATACCCCAGTGTCTGAGCAGCTCTCAGTTCCCCAGA
GATCCGTGGGCAGGATCATAGGGAGAGGTGGGGAGACGATTCGTTCTATCTGTAAGGCCTCTGGAGCCAAAATTACCTGT
GACAAAGAATCAGAGGGGACGTTACTACTATCAAGACTTATCAAAATCTCAGGAACACAGAAGGAAGTGGCAGCAGCCAA
GCATTTGATACTGGAGAAAGTTTCAGAAGATGAAGAACTTCGGAAGAGAATTGCCCATTCTGCAGAAACCAGAGTCCCAC
GCAAACAGCCAATCAGTGTAAGAAGAGAGGAAGTCACCGAGTCTGGTGGAGCTGGAGAGCCAGCTTTGTGGAAAAACACT
GGTACTGGCACAGAGCCAGAGCCAGCTACGACGCCACTGGGAGCTCCTTCCCAAAAAGGAGGTGGTGACATGGCTGGTGT
AGGGCCAGAAGGTGCTTGGGAGAAACCCAATGGTGACAACTTTCAGAAATCTGGAGTCCAGACCAGTCCTGAGATGTCCA
TGTTTGAAATCCCTAGTCCTGACTTCAGTTTTCATGCCGATGAGTTCCTGGAAGTCTACGTCTCTGCCTCCGAACATCCC
AACCACTTCTGGATCCAAATCATTGGCTCCCGCAGCCTGCAGCTGGATAAGCTTGTCAGTGAGATGACCCAGCACTATGA
GAATAGTCTACCTGAAGACTTGACTGTGCATGTGGGAGACATTGTAGCAGCACCTTTACCTACAAACGGTTCCTGGTATC
GAGCTCGGGTCCTTGGCACCTTGGAGAATGGGAACCTGGACCTGTACTTCGTTGACTTTGGAGATAATGGAGATTGCCCA
CTGAAGGACCTCCGAGCACTCAGGAGTGACTTCCTAAGCCTTCCATTTCAAGCAATAGAGTGTAGTCTGGCACGGATCGC
CCCTTCAGGTGAACAGTGGGAAGAGGAAGCTTTGGATGAGTTTGACAGACTGACTCACTGTGCTGACTGGAAGCCCCTGA
TGGCCAAGATCTCCAGCTATGTCCAGACTGGTATCTCAACTTGGCCCAAGATTTACTTATATGATACTAGCAATGGGAAG
AAACTTGATATTGGGTTAGAATTAGTTCGTAAAGGATATGCAGTTGAGCTTCCCGAAGACATGGAAGAAACCAGAGCTGT
CCCAGACATGTTGCACGATGTGGCCACAGAAACAGATGTCTCTCTTGGCAGCATGCTCACTGAGCCCAAGAAGAGCCCTG
GAGAGATAGCAAATACCCTGTCTTGCCTCAGCTTATCAGAAGCTGCCTCTATGTCTGGTGATGATAACCTGGAAGATGAC
TACTTACTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 34 .85 RPM |
| SRP017611_kidney | 46 .23 RPM |
| SRP017611_liver | 29 .59 RPM |
| SRP012049_cerebellum | 47 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000001387 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001839 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_514 | 90.17 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012856 retrocopies