Parental gene:

SEC11A, ENSCAFG00000012889

Aliases:SEC11A, SEC11L1, SPC18
Description:Canis lupus familiaris SEC11 homolog A (S. cerevisiae) (SEC11A), mRNA. [Source:RefSeq mRNA;Acc:NM_001003313]
Organism:Dog (Canis familiaris)
Coordinates:3:53940843..53980335(-)


>ENSCAFG00000012889
ATGCTGTCTCTAGATTTTTTGGACGATGTGCGTCGAATGAACAAGCGGCAGCTGTATTATCAAGTCCTAAATTTTGGAAT
GATTGTCTCCTCGGCACTAATGATCTGGAAGGGGCTGATGGTCATAACTGGAAGTGAAAGTCCAATTGTAGTGGTGCTCA
GTGGCAGCATGGAGCCAGCATTTCATAGAGGAGATCTTCTCTTTTTAACAAATCGAGTTGAAGATCCCATCCGAGTGGGA
GAAATTGTTGTTTTTAGGATAGAAGGAAGAGAGATTCCTATAGTTCACCGAGTCTTGAAGATTCATGAAAAGCAAAATGG
ACATATCAAGTTTTTGACCAAAGGAGATAATAATGCCGTTGATGACCGAGGCCTCTATAAACAAGGACAACACTGGCTAG
AGAAGAAGGATGTCGTGGGGAGAGCAAGGGGATTTGTTCCTTATATTGGAATTGTGACGATCCTCATGAATGACTATCCG
AAATTTAAGTATGCCGTCCTCTTCTTGCTGGGTTTATTCGTGCTGGTCCATCGTGAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 14 .29 RPM
SRP017611_kidney 70 .07 RPM
SRP017611_liver 26 .32 RPM
SRP012049_cerebellum 33 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016146 ortholog_one2one 1 retrogene
retro_cjac_1496,
Felis catus ENSFCAG00000029786 ortholog_one2one 2 retrogenes
retro_fcat_1178, retro_fcat_1908,
Homo sapiens ENSG00000140612 ortholog_one2one 1 retrogene
retro_hsap_4058,
Gorilla gorilla ENSGGOG00000011129 ortholog_one2one 1 retrogene
retro_ggor_2726,
Monodelphis domestica ENSMODG00000019364 ortholog_one2one 1 retrogene
retro_mdom_726,
Pongo abelii ENSPPYG00000006881 ortholog_one2one 1 retrogene
retro_pabe_3333,
Pan troglodytes ENSPTRG00000007404 ortholog_one2one 1 retrogene
retro_ptro_2751,
Tupaia belangeri ENSTBEG00000012320 ortholog_one2one 3 retrogenes
retro_tbel_1139, retro_tbel_2280, retro_tbel_745,
Tursiops truncatus ENSTTRG00000005833 ortholog_one2one 1 retrogene
retro_ttru_1237,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1416 78.53 90.50
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Download FASTA sequences of all ENSCAFG00000012889 retrocopies