Parental gene:

SEC11A, ENSFCAG00000029786

Aliases:None
Description:SEC11 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17718]
Organism:Cat (Felis catus)
Coordinates:B3:4750539..4791285(+)


>ENSFCAG00000029786
ATGCTGTCTCTAGATTTTTTGGACGATGTGCGGCGAATGAACAAGCGGCAGCTGTATTATCAAGTCCTAAATTTTGGAAT
GATCGTTTCCTCGGCACTAATGATCTGGAAGGGGTTAATGGTCATAACCGGAAGTGAAAGTCCGATCGTAGTGGTGCTCA
GTGGCAGCATGGAACCTGCATTTCATAGAGGAGATCTTCTCTTTTTAACAAACCGAGTTGAAGATCCCATCCGAGTGGGA
GAAATTGTTGTTTTTAGGATAGAAGGAAGAGAGATTCCTATAGTTCATCGAGTCTTGAAGATTCATGAAAAGCAAAATGG
ACATATCAAGTTTTTGACCAAAGGAGATAATAATGCAGTTGATGACCGAGGCCTCTATAAACAAGGACAACACTGGCTGG
AGAAGAAGGATGTCGTGGGGAGAGCGAGGGGATTTGTTCCTTATATTGGGATTGTGACGATCCTCATGAATGACTACCCT
AAATTTAAGTACGCGGTACTCTTTTTGCTGGGTTTATTTGTGCTGGTCCATCGTGAGTAA

Library Parental gene expression (RPM)
SRP017611_liver 42 .26 RPM
SRP017611_kidney 43 .80 RPM
SRP017611_brain 11 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012889 ortholog_one2one 1 retrogene
retro_cfam_1416,
Callithrix jacchus ENSCJAG00000016146 ortholog_one2one 1 retrogene
retro_cjac_1496,
Felis catus ENSFCAG00000006501 within_species_paralog 1 retrogene
retro_fcat_1815,
Homo sapiens ENSG00000140612 ortholog_one2one 1 retrogene
retro_hsap_4058,
Gorilla gorilla ENSGGOG00000011129 ortholog_one2one 1 retrogene
retro_ggor_2726,
Monodelphis domestica ENSMODG00000019364 ortholog_one2one 1 retrogene
retro_mdom_726,
Pongo abelii ENSPPYG00000006881 ortholog_one2one 1 retrogene
retro_pabe_3333,
Pan troglodytes ENSPTRG00000007404 ortholog_one2one 1 retrogene
retro_ptro_2751,
Tupaia belangeri ENSTBEG00000012320 ortholog_one2one 3 retrogenes
retro_tbel_1139, retro_tbel_2280, retro_tbel_745,
Tursiops truncatus ENSTTRG00000005833 ortholog_one2one 1 retrogene
retro_ttru_1237,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1178 90.85 78.77
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2. retro_fcat_1908 81.75 69.27
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Download FASTA sequences of all ENSFCAG00000029786 retrocopies