Parental gene: | SCCPDH, ENSCAFG00000015884 |
| Aliases: | None |
| Description: | saccharopine dehydrogenase (putative) [Source:HGNC Symbol;Acc:24275] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 7:37450263..37487514(+) |
>ENSCAFG00000015884
TCTGGAAGATCTAATACTGTATCAGAATTTGCTTCAGACGATTTATTTCTTATTCCAGGAAGACCGACTCTCCCGTCCGA
AGTTGGAATAATAATTTGTGATATCACGAATCCAGCCTCACTAGATGAAATGGCTAAACAGGCAGCGGTTGTCCTCAACT
GTGTGGGACCATATCGGTTTTATGGAGAACCTGTGATAAAAGCATGTATTGAAAATGGAACCAGCTGTATTGACATCTGT
GGAGAACCTCAGTTTCTGGAGTTAATGTATTGGAAGTATCATGAGAAAGCTGCAGAAAAAGGGGTTTATATCATCGGAAG
CAGTGGCTTTGACTCCATTCCAGCAGATCTGGGCGTAATATATACCAAAAATAAGATGAACGGTACCCTGACTGCTGTGG
AAAGTTTCCTGACTATACATTCCGGACCTGAGGGGTTGTGCATTCATGATGGTACCTGGAAGTCTGCAGTTTATGGTTTT
GGAGATCAGAGTAATTTGAAAAAACTGCGAAACGAGTCAAATCTGAAACCTGTCCCAATTGTTGGTCCAAAATTGAAAAG
AAGGTGGCCAATTTCTTACTGCAGAGAACTGAATAGCTATTCTATTCCTTTCTTGGGAGCGGATGTCTCTGTTGTGAGGC
GGACTCAGCGTTACTTGCATGAGAATTTGGAGCAATCGCCTGTTCAGTATGCCGCTTATGTGACTGTGGGAGGCATCACC
TCCGTTATTAAGCTGATGTTTGCAGGACTTTTCTTTTTATTCTTTGTGAAGTGTGGCATTGGCAGACAGCTTCTCATAAA
ATTTCCATGGCTCTTCTCCTTTGGTTATTTTTCAAAACAAGGTCCAACACAAAAACAGATGGATGCCGCCTCGTTTACAA
TGACATTCTTTGGTCAAGGATACAGTCAAGGCTTTGGTCCGGAGAAGAACAAACCAAATATGAGAATTTGTACTCAGGTG
AAAGGACCAGAGGCTGGCTACGTGGCTACCCCCATAGCCATGGTCCAGGCAGCCATGACACTTCTAAACGATACCTCTGA
TCTTCCTAACACGGGCGGGGTCTTCACACCTGGAGCAGCCTTCTGCAGAACAAAGTTGATTGACAGACTCAACCAACGTG
GCATTGAATTTAGTGTCATTAGCAGCTCTGAAGTC
TCTGGAAGATCTAATACTGTATCAGAATTTGCTTCAGACGATTTATTTCTTATTCCAGGAAGACCGACTCTCCCGTCCGA
AGTTGGAATAATAATTTGTGATATCACGAATCCAGCCTCACTAGATGAAATGGCTAAACAGGCAGCGGTTGTCCTCAACT
GTGTGGGACCATATCGGTTTTATGGAGAACCTGTGATAAAAGCATGTATTGAAAATGGAACCAGCTGTATTGACATCTGT
GGAGAACCTCAGTTTCTGGAGTTAATGTATTGGAAGTATCATGAGAAAGCTGCAGAAAAAGGGGTTTATATCATCGGAAG
CAGTGGCTTTGACTCCATTCCAGCAGATCTGGGCGTAATATATACCAAAAATAAGATGAACGGTACCCTGACTGCTGTGG
AAAGTTTCCTGACTATACATTCCGGACCTGAGGGGTTGTGCATTCATGATGGTACCTGGAAGTCTGCAGTTTATGGTTTT
GGAGATCAGAGTAATTTGAAAAAACTGCGAAACGAGTCAAATCTGAAACCTGTCCCAATTGTTGGTCCAAAATTGAAAAG
AAGGTGGCCAATTTCTTACTGCAGAGAACTGAATAGCTATTCTATTCCTTTCTTGGGAGCGGATGTCTCTGTTGTGAGGC
GGACTCAGCGTTACTTGCATGAGAATTTGGAGCAATCGCCTGTTCAGTATGCCGCTTATGTGACTGTGGGAGGCATCACC
TCCGTTATTAAGCTGATGTTTGCAGGACTTTTCTTTTTATTCTTTGTGAAGTGTGGCATTGGCAGACAGCTTCTCATAAA
ATTTCCATGGCTCTTCTCCTTTGGTTATTTTTCAAAACAAGGTCCAACACAAAAACAGATGGATGCCGCCTCGTTTACAA
TGACATTCTTTGGTCAAGGATACAGTCAAGGCTTTGGTCCGGAGAAGAACAAACCAAATATGAGAATTTGTACTCAGGTG
AAAGGACCAGAGGCTGGCTACGTGGCTACCCCCATAGCCATGGTCCAGGCAGCCATGACACTTCTAAACGATACCTCTGA
TCTTCCTAACACGGGCGGGGTCTTCACACCTGGAGCAGCCTTCTGCAGAACAAAGTTGATTGACAGACTCAACCAACGTG
GCATTGAATTTAGTGTCATTAGCAGCTCTGAAGTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 59 .94 RPM |
| SRP017611_kidney | 164 .96 RPM |
| SRP017611_liver | 58 .45 RPM |
| SRP012049_cerebellum | 55 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000016354 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006356 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_842 | 96.14 | 53.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000015884 retrocopies