Parental gene: | SCCPDH, ENSDNOG00000016354 |
| Aliases: | None |
| Description: | saccharopine dehydrogenase (putative) [Source:HGNC Symbol;Acc:24275] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3823:27991..133609(+) |
>ENSDNOG00000016354
AGACCAACACTGTCATCTGAAGTTGGAATGATAGTTTGCGATATCACTAATCCAGCCTCACTTGATGAAATGGCTAAACA
GGCAACAGTTGTCCTCAATTGTGTAGGACCATATCGATTCTACGGAGAACCTGTAGTAAAAGCATGTGTTGAAAATGGAA
CTAGCTATATTGACATCTGTGGAGAACCTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGTACTTTGACTGCTGTGGAAAGTTTCCTGACTCTACATGTGGGACCTGAGGGAATGTGCATTCATGATGGTACCTGGA
AGTCAGCAGTTAATGGTTTTGGAGATCGGAGTAATTTGAAAATTCTACGAAATGAGTCCAACCTGAAACCTGTTCCATTC
GTTGGCCCCAAATTGAAAAGAAGACCAATTTCTTACTGTAGAGAACTCAGCACATATACCATTCCTTTCTTGAGATCTGA
TGTATCTGTTGTGAAACGGACTCAGCGTTACTTGCATGAAAATTTAGAGGAAACACCAGTTCAGTATGCTGCTTATGTGA
CTATGGAACGCATCACTTCTGTTATTAAGCTGATGTTTGCAGGATTTCTCTTTTCATTCTTTGTGAAGTTTAGCATTGGA
AGGCAACTTCTCATAAAATTCCCATGGCTCTTCTCCTTTGGTTATTTTTCAAAACAAGGCCCAACCCAGAAACAGATTGA
CAGTGCATCATTTACAATGACATTCTTTGGTCAAGGATATAGCCAAGGCCTTCCTACCGATAAGAGCAAACCCAATATCA
GAATTTGTACTCAGGTGAAAGGACCAGACGCCGGCTATATAGCTACATCCATAGCCATGGTGCAGGCAGCGGTGACTCTT
CTGAATGACGCCTCCAACCTTCCTAAGACGGGCGAGATCTTCACGCCCGGAGCAGCCTTCTCCAGGACGAGGCTGATTGA
CAGACTGAACCAGCGTGGCATTGAATTCAGTGTCCTTAGCTCTGAAGTCTAA
AGACCAACACTGTCATCTGAAGTTGGAATGATAGTTTGCGATATCACTAATCCAGCCTCACTTGATGAAATGGCTAAACA
GGCAACAGTTGTCCTCAATTGTGTAGGACCATATCGATTCTACGGAGAACCTGTAGTAAAAGCATGTGTTGAAAATGGAA
CTAGCTATATTGACATCTGTGGAGAACCTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGTACTTTGACTGCTGTGGAAAGTTTCCTGACTCTACATGTGGGACCTGAGGGAATGTGCATTCATGATGGTACCTGGA
AGTCAGCAGTTAATGGTTTTGGAGATCGGAGTAATTTGAAAATTCTACGAAATGAGTCCAACCTGAAACCTGTTCCATTC
GTTGGCCCCAAATTGAAAAGAAGACCAATTTCTTACTGTAGAGAACTCAGCACATATACCATTCCTTTCTTGAGATCTGA
TGTATCTGTTGTGAAACGGACTCAGCGTTACTTGCATGAAAATTTAGAGGAAACACCAGTTCAGTATGCTGCTTATGTGA
CTATGGAACGCATCACTTCTGTTATTAAGCTGATGTTTGCAGGATTTCTCTTTTCATTCTTTGTGAAGTTTAGCATTGGA
AGGCAACTTCTCATAAAATTCCCATGGCTCTTCTCCTTTGGTTATTTTTCAAAACAAGGCCCAACCCAGAAACAGATTGA
CAGTGCATCATTTACAATGACATTCTTTGGTCAAGGATATAGCCAAGGCCTTCCTACCGATAAGAGCAAACCCAATATCA
GAATTTGTACTCAGGTGAAAGGACCAGACGCCGGCTATATAGCTACATCCATAGCCATGGTGCAGGCAGCGGTGACTCTT
CTGAATGACGCCTCCAACCTTCCTAAGACGGGCGAGATCTTCACGCCCGGAGCAGCCTTCTCCAGGACGAGGCTGATTGA
CAGACTGAACCAGCGTGGCATTGAATTCAGTGTCCTTAGCTCTGAAGTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 92 .37 RPM |
| SRP012922_cerebellum | 70 .38 RPM |
| SRP012922_heart | 57 .08 RPM |
| SRP012922_kidney | 285 .02 RPM |
| SRP012922_liver | 1488 .47 RPM |
| SRP012922_lung | 49 .02 RPM |
| SRP012922_quadricep_muscle | 246 .13 RPM |
| SRP012922_spleen | 85 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015884 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006356 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1482 | 71.21 | 52.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000016354 retrocopies