Parental gene: | MTHFD1, ENSCAFG00000015967 |
| Aliases: | None |
| Description: | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:HGNC Symbol;Acc:7432] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 8:38831901..38889787(+) |
>ENSCAFG00000015967
AGTCGATCATCAGTTTTGGTGGTGTCCATCGTGGGCAGCGGACTAATAAAGGCCATGGCACCGGCGGAAATCCTGAACGG
GAAGGTGGTCTCCGCGCAAATAAGGGAGAGACTGAAGAATGAAGTCACTCAGATGAAGGAACAAGTTCCTGGTTTTATAC
CAGGCCTGGCAATTTTACAGGTTGGCGACAGAGATGATTCTAATCTTTATATAAATGTGAAGCTGAAGGCTGCTGAAGAG
ATTGGGATCAGAGCCACGCACATTAAGTTACCAAAAACAGCCACAGAATCTGAGGTATTAAAGTATGTTACATCATTGAA
TGAAGACCTCACTGTCCATGGTTTCATAGTGCAGCTGCCTTTAGATTCAGAGAACCCCATTAACACTGAAGCAGTGATCA
ATGCTATTGTACCCGAAAAGGATGTGGATGGGTTGACTAGCATCAGTGCTGGAAAACTTGCTAGAGGTGATCTGAAAGAC
TGTTTCATCCCTTGTACACCTAAAGGATGCTTGGAACTAATCAAAGAGACAGGGGTACAGATCGCTGGAAGGCACGCTGT
AGTAGTTGGGCGCAGTAAGATAGTTGGTGCCCCGATGCATGACCTGCTTCTGTGGAACCATGCCACAGTGACCACCTGCC
ACTCCAAGACTGCCAATCTAAGCGAGGAGGTAAATAAAGGTGACATCCTGGTGGTTGCAACTGGTCAGCCAGAAATGGTA
AAAGGGGAGTGGATCAAACCTGGGGCAATAGTCATCGACTGCGGGATCAATTATATTCCAGATGATACAAAACCAAATGG
GAGAAAAGTGGTGGGTGATGTGGCATACAATGAGGCCAAGGAGAGGGCGGGCTTCATCACTCCTGTTCCTGGCGGCGTGG
GGCCCATGACGGTGGCAATGCTAATGCAGAGCACAGTGGAGAGTGCGAAGCGTTTCCTGGAGAAATTTAAGCCAGGAAAG
TGGATGATTCAATATAACAACCTTAACCTCAAGACTCCTGTTCCAAGTGACATTGATATATCACGGTCTTGTAAGCCAAA
GCCCATTGGCAGCCTGGCGCGGGAAATTGGTCTGCTCTCTGAAGAGGTGGAATTATATGGTGATACAAAGGCCAAGGTTC
TGCTATCAGCACTGGAACGCCTGAAGCACCAGCCTGATGGAAAATACGTGGTGGTGACTGGAATCACCCCAACGCCCCTG
GGAGAAGGGAAAAGCACAACCACCATTGGGCTGGTGCAGGCCCTTGGCGCCCATCTTCATCAGAACGTCTTTGCATGTGT
ACGACAGCCTTCTCAGGGCCCGACCTTTGGAATAAAAGGTGGCGCTGCAGGAGGTGGCTACTCACAGGTCATTCCCATGG
AAGAGTTTAATCTCCACCTCACTGGTGACATCCATGCCATCACTGCAGCGAATAACCTTGTCGCCGCGGCCATCGATGCC
CGGATGTTCCACGAACTGACGCAGACAGACAAGGCTCTCTTTAATCGTTTGGTACCATCAGTAAATGGAGTGAGAAAGTT
CTCTGATATCCAAATCCGAAGATTACAGAGACTGGGTATTGAAAAAACTGACCCTACCACACTGACTGATGACGAGATAA
ACAGATTTGCAAGATTGGACATTGATCCAGAAACCATAACTTGGCAAAGAGTATTGGATACCAACGATAGATTCCTAAGG
AAGATCACAATCGGACAGGCTCCAACAGAAAAAGGGCACACACGGACGGCCCAGTTTGATATCTCTGTGGCCAGTGAAAT
CATGGCTGTGCTGGCTCTCACCAGTTCACTAGAAGACATGAGAGAGAGACTGAGCAAAATGGTGGTGGCATCCAGCAAGA
AAGGGGAGCCTATCAGTACCGAAGATCTGGGGGTGAGTGGTGCATTGACAGTGCTTATGAAGGATGCAATCAAGCCTAAT
CTCATGCAGACATTAGAGGGCACTCCAGTTTTCGTTCATGCTGGACCATTTGCCAACATCGCACATGGGAATTCCTCTAT
CATTGCAGACCGGATTGCACTCAAGCTTGTTGGCCCTGAAGGGTTCGTGGTGACTGAAGCAGGATTTGGAGCAGACATTG
GAATGGAAAAGTTTTTTAACATCAAATGCCGGTATTCTGGTCTCCGCCCTCATGTAGTGGTGCTTGTTGCCACTGTCAGG
GCTCTTAAAATGCACGGAGGCGGCCCCATGGTTACTGCTGGACTGCCTCTTCCCGAGGCTTACATAGTGGAGAACCTGGA
GCTGGTTGAAAAAGGCTTCAGTAACTTAAAGAAACAAATTGAAAATGCCAGAATGTTTGGAGTTCCTGTGGTCGTGGCCG
TGAATGCATTCAAGACAGATACGGAGGCCGAGCTGGACCTCGTCAGCCGCCTTGCCAAAGAACATGGGGCTTTTGATGCT
GTGAAATGCACGCACTGGGCAGAAGGGGGTATGGGTGCCTTAGCCCTAGCTCAGGCTGTCCAGAGAGCAGCTCAGGCACC
CAGCAGCTTCCAGCTCCTTTATGACCTCAAGCTCCCAGTTGAGGATAAAATCAGGATCATCGCACAGAAAATCTATGGGG
CTGACGACATAGAATTGCTTCCTGAAGCTCAACACAAAGCTGAAGTCTACACGAAACAGGGCTTTGGGAACCTGCCTATC
TGCATGGCCAAAACACACTTGTCCTTGTCTCATAACCCAGAGCAAAAGGGTGTGCCCACAGGCTTTGTCTTGCCCATTCG
TGACATCCGTGCCAGCGTCGGGGCCGGTTTTCTGTACCCCTTGGTAGGGACGATTGCCTCTCTTCAAGATGCTGCTCCAA
ACATTTGGCCAATGTGCATTCAGGCCGACTGTTGGTTAGGAAGTGTGGGGAAGTCGAGAGAAGTCAACCCCTGCCCTGAA
GATCTTAGAAAAAGCCTCTCTTTGGTCTTAATCCCCACCATCATGTATAAATTAACGACACATCATCAG
AGTCGATCATCAGTTTTGGTGGTGTCCATCGTGGGCAGCGGACTAATAAAGGCCATGGCACCGGCGGAAATCCTGAACGG
GAAGGTGGTCTCCGCGCAAATAAGGGAGAGACTGAAGAATGAAGTCACTCAGATGAAGGAACAAGTTCCTGGTTTTATAC
CAGGCCTGGCAATTTTACAGGTTGGCGACAGAGATGATTCTAATCTTTATATAAATGTGAAGCTGAAGGCTGCTGAAGAG
ATTGGGATCAGAGCCACGCACATTAAGTTACCAAAAACAGCCACAGAATCTGAGGTATTAAAGTATGTTACATCATTGAA
TGAAGACCTCACTGTCCATGGTTTCATAGTGCAGCTGCCTTTAGATTCAGAGAACCCCATTAACACTGAAGCAGTGATCA
ATGCTATTGTACCCGAAAAGGATGTGGATGGGTTGACTAGCATCAGTGCTGGAAAACTTGCTAGAGGTGATCTGAAAGAC
TGTTTCATCCCTTGTACACCTAAAGGATGCTTGGAACTAATCAAAGAGACAGGGGTACAGATCGCTGGAAGGCACGCTGT
AGTAGTTGGGCGCAGTAAGATAGTTGGTGCCCCGATGCATGACCTGCTTCTGTGGAACCATGCCACAGTGACCACCTGCC
ACTCCAAGACTGCCAATCTAAGCGAGGAGGTAAATAAAGGTGACATCCTGGTGGTTGCAACTGGTCAGCCAGAAATGGTA
AAAGGGGAGTGGATCAAACCTGGGGCAATAGTCATCGACTGCGGGATCAATTATATTCCAGATGATACAAAACCAAATGG
GAGAAAAGTGGTGGGTGATGTGGCATACAATGAGGCCAAGGAGAGGGCGGGCTTCATCACTCCTGTTCCTGGCGGCGTGG
GGCCCATGACGGTGGCAATGCTAATGCAGAGCACAGTGGAGAGTGCGAAGCGTTTCCTGGAGAAATTTAAGCCAGGAAAG
TGGATGATTCAATATAACAACCTTAACCTCAAGACTCCTGTTCCAAGTGACATTGATATATCACGGTCTTGTAAGCCAAA
GCCCATTGGCAGCCTGGCGCGGGAAATTGGTCTGCTCTCTGAAGAGGTGGAATTATATGGTGATACAAAGGCCAAGGTTC
TGCTATCAGCACTGGAACGCCTGAAGCACCAGCCTGATGGAAAATACGTGGTGGTGACTGGAATCACCCCAACGCCCCTG
GGAGAAGGGAAAAGCACAACCACCATTGGGCTGGTGCAGGCCCTTGGCGCCCATCTTCATCAGAACGTCTTTGCATGTGT
ACGACAGCCTTCTCAGGGCCCGACCTTTGGAATAAAAGGTGGCGCTGCAGGAGGTGGCTACTCACAGGTCATTCCCATGG
AAGAGTTTAATCTCCACCTCACTGGTGACATCCATGCCATCACTGCAGCGAATAACCTTGTCGCCGCGGCCATCGATGCC
CGGATGTTCCACGAACTGACGCAGACAGACAAGGCTCTCTTTAATCGTTTGGTACCATCAGTAAATGGAGTGAGAAAGTT
CTCTGATATCCAAATCCGAAGATTACAGAGACTGGGTATTGAAAAAACTGACCCTACCACACTGACTGATGACGAGATAA
ACAGATTTGCAAGATTGGACATTGATCCAGAAACCATAACTTGGCAAAGAGTATTGGATACCAACGATAGATTCCTAAGG
AAGATCACAATCGGACAGGCTCCAACAGAAAAAGGGCACACACGGACGGCCCAGTTTGATATCTCTGTGGCCAGTGAAAT
CATGGCTGTGCTGGCTCTCACCAGTTCACTAGAAGACATGAGAGAGAGACTGAGCAAAATGGTGGTGGCATCCAGCAAGA
AAGGGGAGCCTATCAGTACCGAAGATCTGGGGGTGAGTGGTGCATTGACAGTGCTTATGAAGGATGCAATCAAGCCTAAT
CTCATGCAGACATTAGAGGGCACTCCAGTTTTCGTTCATGCTGGACCATTTGCCAACATCGCACATGGGAATTCCTCTAT
CATTGCAGACCGGATTGCACTCAAGCTTGTTGGCCCTGAAGGGTTCGTGGTGACTGAAGCAGGATTTGGAGCAGACATTG
GAATGGAAAAGTTTTTTAACATCAAATGCCGGTATTCTGGTCTCCGCCCTCATGTAGTGGTGCTTGTTGCCACTGTCAGG
GCTCTTAAAATGCACGGAGGCGGCCCCATGGTTACTGCTGGACTGCCTCTTCCCGAGGCTTACATAGTGGAGAACCTGGA
GCTGGTTGAAAAAGGCTTCAGTAACTTAAAGAAACAAATTGAAAATGCCAGAATGTTTGGAGTTCCTGTGGTCGTGGCCG
TGAATGCATTCAAGACAGATACGGAGGCCGAGCTGGACCTCGTCAGCCGCCTTGCCAAAGAACATGGGGCTTTTGATGCT
GTGAAATGCACGCACTGGGCAGAAGGGGGTATGGGTGCCTTAGCCCTAGCTCAGGCTGTCCAGAGAGCAGCTCAGGCACC
CAGCAGCTTCCAGCTCCTTTATGACCTCAAGCTCCCAGTTGAGGATAAAATCAGGATCATCGCACAGAAAATCTATGGGG
CTGACGACATAGAATTGCTTCCTGAAGCTCAACACAAAGCTGAAGTCTACACGAAACAGGGCTTTGGGAACCTGCCTATC
TGCATGGCCAAAACACACTTGTCCTTGTCTCATAACCCAGAGCAAAAGGGTGTGCCCACAGGCTTTGTCTTGCCCATTCG
TGACATCCGTGCCAGCGTCGGGGCCGGTTTTCTGTACCCCTTGGTAGGGACGATTGCCTCTCTTCAAGATGCTGCTCCAA
ACATTTGGCCAATGTGCATTCAGGCCGACTGTTGGTTAGGAAGTGTGGGGAAGTCGAGAGAAGTCAACCCCTGCCCTGAA
GATCTTAGAAAAAGCCTCTCTTTGGTCTTAATCCCCACCATCATGTATAAATTAACGACACATCATCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 50 .18 RPM |
| SRP017611_kidney | 285 .68 RPM |
| SRP017611_liver | 267 .43 RPM |
| SRP012049_cerebellum | 68 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000100714 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005251 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000013011 | ortholog_one2one | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000001319 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006435 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_300 | 87.43 | 57.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000015967 retrocopies