Parental gene: | TMEM216, ENSCAFG00000016171 |
| Aliases: | None |
| Description: | transmembrane protein 216 [Source:HGNC Symbol;Acc:25018] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 18:55014274..55038184(-) |
>ENSCAFG00000016171
ATGGCGTCGCGAGGTAAACGGCTGTCCTCCACCCCGCTGGAAATCCTGTTCTTTCTGAACGGGTGGTACTATGCTACCTA
TTTTCTCCTGGAACTCTTCATATTTCTGTATAAAGCTCTCCTCCTACCATATCCAACAGCCAATCTAGTACTGGATGTGG
TGATGCTTCTCCTTTACCTCGGAATTGAAGTAATTCGACTGTTTTTTGGTACAAAGGGGAACCTCTGCCAGCGAAAGATG
CCACTTGGGTTTAGCGTGGCCTTGACCTTCCCATCTGCCATGATGGCCTCCTATTACCTGCTGCTGCAGACCTACGTGCT
CCGCCTGGAAGCCATCATGAACAGCATCTTGCTCTTCTTCTGTGGTTCAGAGCTGCTGCTTGAGGTGCTCACCCTGACTG
CTTTCTCCAGTATGGACAGGATATGA
ATGGCGTCGCGAGGTAAACGGCTGTCCTCCACCCCGCTGGAAATCCTGTTCTTTCTGAACGGGTGGTACTATGCTACCTA
TTTTCTCCTGGAACTCTTCATATTTCTGTATAAAGCTCTCCTCCTACCATATCCAACAGCCAATCTAGTACTGGATGTGG
TGATGCTTCTCCTTTACCTCGGAATTGAAGTAATTCGACTGTTTTTTGGTACAAAGGGGAACCTCTGCCAGCGAAAGATG
CCACTTGGGTTTAGCGTGGCCTTGACCTTCCCATCTGCCATGATGGCCTCCTATTACCTGCTGCTGCAGACCTACGTGCT
CCGCCTGGAAGCCATCATGAACAGCATCTTGCTCTTCTTCTGTGGTTCAGAGCTGCTGCTTGAGGTGCTCACCCTGACTG
CTTTCTCCAGTATGGACAGGATATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 2 .62 RPM |
| SRP017611_kidney | 7 .79 RPM |
| SRP017611_liver | 2 .18 RPM |
| SRP012049_cerebellum | 2 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016592 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000021517 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000020362 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000014169 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000001682 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_331 | 64.71 | 71.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_332 | 70.63 | 97.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_333 | 72.54 | 98.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_1342 | 79.10 | 93.62 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000016171 retrocopies